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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2qq8A_

Fold library idPDB HeaderMoleculeTitle
c2qq8A_PDB header: hydrolase activatorChain: A: PDB Molecule: tbc1 domain family member 14;PDBTitle: crystal structure of the putative rabgap domain of human2 tbc1 domain family member 14


Added to library: Tue Mar 16 12:10:38 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence YFQGNAVLTWNNEILPNWEWCSRKVRDLWWQGIPPSVRGKVWSLAIGNELNITHELFDICLARAKERWEA
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Known secondary structure (DSSP)

SS
TTGGG




T




TT





 .........80.........90.........100.........110.........120.........130.........140
Sequence SLELIKLDISRTFPNLCIFQQGGPYHDMLHSILGAYTCYRPDVGYVQGMSFIAAVLILNLDTADAFIAFS
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Known secondary structure (DSSP) TSSGGG
SSSTTSTT
TTT


TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDWIFTLYSKSLPLDLAC
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Known secondary structure (DSSP) TSSS


TT

GGGTTTTTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RIWDVFCRDGEEFLFRTALGILKLFEDILTKMDFIHMAQFLTRLPEDLPAEELFASIATIQMQSRNKKWA
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Known secondary structure (DSSP)
TT

S

TT




TT
 ........
Sequence QVLTALQK
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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