Fold library entry viewer: c2qo3A_

Added to library: Tue Mar 16 14:05:51 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	S	D	P	I	A	I	V	S	M	A	C	R	L	P	G	G	V	N	T	P	Q	R	L	W	E	L	L	R	E	G	G	E	T	L	S	G	F	P	T	D	R	G	W	D	L	A	R	L	H	H	P	D	P	D	N	P	G	T	S	Y	V	D	K	G	G	F	L	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	T	T			S										T	T									S	S	S								B		S		T	T	S	T	T		B	S					B			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	A	G	F	D	A	E	F	F	G	V	S	P	R	E	A	A	A	M	D	P	Q	Q	R	L	L	L	E	T	S	W	E	L	V	E	N	A	G	I	D	P	H	S	L	R	G	T	A	T	G	V	F	L	G	V	A	K	F	G	Y	G	E	D	T	A	D	V	E	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S								T								T	S																		T	T			G	G	G	G	T	T	B													T	T	T	T				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	V	T	G	V	A	P	A	V	A	S	G	R	I	S	Y	T	M	G	L	E	G	P	S	I	S	V	D	T	A	C	S	S	S	L	V	A	L	H	L	A	V	E	S	L	R	K	G	E	S	S	M	A	V	V	G	G	A	A	V	M	A	T	P	G	V	F	V	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T														T	B		S								G	G	G															T	T	S		S	S										S	S	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	R	Q	R	A	L	A	A	D	G	R	S	K	A	F	G	A	G	A	D	G	F	G	F	S	E	G	V	T	L	V	L	L	E	R	L	S	E	A	R	R	N	G	H	E	V	L	A	V	V	R	G	S	A	L	N	Q	D	G	A	S	N	G	L	S	A	P	S	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T		B		S	S					T	T	B	T	T				B		B	B																	T	T																	S		S	S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	Q	R	R	V	I	R	Q	A	L	E	S	C	G	L	E	P	G	D	V	D	A	V	E	A	H	G	T	G	T	A	L	G	D	P	I	E	A	N	A	L	L	D	T	Y	G	R	D	R	D	A	D	R	P	L	W	L	G	S	V	K	S	N	I	G	H	T	Q	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T			G	G	G												T	T	T												T	S	S	S			T	T	S							T						B		G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	G	V	T	G	L	L	K	V	V	L	A	L	R	N	G	E	L	P	A	T	L	H	V	E	E	P	T	P	H	V	D	W	S	S	G	G	V	A	L	L	A	G	N	Q	P	W	R	R	G	E	R	T	R	R	A	A	V	S	A	F	G	I	S	G	T	N	A	H	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T						S	S		S	S	B		T	T	S			S	S	S	S					S	S						S	S	S	S											T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	V	E	E	A	P	E	H	D	G	R	P	V	P	L	V	V	S	A	R	S	T	A	A	L	R	A	Q	A	A	Q	I	A	E	L	L	E	R	P	D	A	D	L	A	G	V	G	L	G	L	A	T	T	R	A	R	H	E	H	R	A	A	V	V	A	S	T	R	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S									S	S															T	T	S	S	S													S	S				S								S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	V	R	G	L	R	E	I	A	A	G	A	A	T	A	D	A	V	V	E	G	V	T	E	V	D	G	R	N	V	V	F	L	F	P	G	Q	G	S	Q	W	A	G	M	G	A	E	L	L	S	S	S	P	V	F	A	G	K	I	R	A	C	D	E	S	M	A	P	M	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T					T	T							S		S											T	T				T	T	T	T						S															T	G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	D	W	K	V	S	D	V	L	R	Q	A	P	G	A	P	G	L	D	R	V	D	V	V	Q	P	V	L	F	A	V	M	V	S	L	A	E	L	W	R	S	Y	G	V	E	P	A	A	V	V	G	H	S	Q	G	E	I	A	A	A	H	V	A	G	A	L	T	L	E	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S								T		T	T				T	T	S																						T	T				S						T	T									T	T	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	K	L	V	V	G	R	S	R	L	M	R	S	L	S	G	E	G	G	M	A	A	V	A	L	G	E	A	A	V	R	E	R	L	R	P	W	Q	D	R	L	S	V	A	A	V	N	G	P	R	S	V	V	V	S	G	E	P	G	A	L	R	A	F	S	E	D	C	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	T	T	S							S	S								T	T	G	G	G	T	T										T	T																			T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	G	I	R	V	R	D	I	D	V	D	Y	A	S	H	S	P	Q	I	E	R	V	R	E	E	L	L	E	T	T	G	D	I	A	P	R	P	A	R	V	T	F	H	S	T	V	E	S	R	S	M	D	G	T	E	L	D	A	R	Y	W	Y	R	N	L	R	E	T	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			B				S		S	S		T	T	S	G	G	G	T	T	T									T	T							S	S					T	T	T		S				G	G	G												S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	F	A	D	A	V	T	R	L	A	E	S	G	Y	D	A	F	I	E	V	S	P	H	P	V	V	V	Q	A	V	E	E	A	V	E	E	A	D	G	A	E	D	A	V	V	V	G	S	L	H	R	D	G	G	D	L	S	A	F	L	R	S	M	A	T	A	H	V	S	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T								S	S	S		S	S										T	S	T	T		S	S						S		B	T	T	B															T	T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.
Sequence	D	I	R	W	D	V	A	L	P	G	A	A	P	F	A	L	P	T	Y	P	F	Q	R	K	R	Y	W	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	G	S	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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