PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2qmwA_

Fold library id	PDB Header	Molecule	Title
c2qmwA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: prephenate dehydratase;	PDBTitle: the crystal structure of the prephenate dehydratase (pdt)2 from staphylococcus aureus subsp. aureus mu50

Links to external resources
Added to library: Tue Mar 16 14:06:54 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X Q L Y Y L G P K G T F S Y L A C R Q Y F S E N E A T F Q P K S N L F E V I K A V A D D D T S I G V V P I E N S I E G T I N I V A D A L A Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S
T T S S S S
S S S
S S S
S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q D V F A H G E I R L D I N F A L Y G N G T D S I S D I K K V Y S I A P A I S Q T T N Y I H Q H Q F D Y D Y V D S T I Q S L T K I E N G V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
S S
S T T
S T T
S S T
B T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A I A P L G S G E A Y G F T P I D T H I E D Y P H N V T R F L V I K N Q Q Q F D Q N A T S L X F L I T P X H D K P G L L A S V L N T F A L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S G G G T
S
S
S
S S
S S S
T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . .

Sequence N I N L S W I E S R P L K T Q L G X Y R F F V Q A D S A I T T D I K K V I A I L E T L D F K V E X I G A F N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S T T
S
S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	Q	L	Y	Y	L	G	P	K	G	T	F	S	Y	L	A	C	R	Q	Y	F	S	E	N	E	A	T	F	Q	P	K	S	N	L	F	E	V	I	K	A	V	A	D	D	D	T	S	I	G	V	V	P	I	E	N	S	I	E	G	T	I	N	I	V	A	D	A	L	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	T	T	S												T	T	S	S						S	S												S	S									S		S	S	S		S									T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	D	V	F	A	H	G	E	I	R	L	D	I	N	F	A	L	Y	G	N	G	T	D	S	I	S	D	I	K	K	V	Y	S	I	A	P	A	I	S	Q	T	T	N	Y	I	H	Q	H	Q	F	D	Y	D	Y	V	D	S	T	I	Q	S	L	T	K	I	E	N	G	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S																		S	S			S	T	T														S							T	T							S	S							T		B	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	I	A	P	L	G	S	G	E	A	Y	G	F	T	P	I	D	T	H	I	E	D	Y	P	H	N	V	T	R	F	L	V	I	K	N	Q	Q	Q	F	D	Q	N	A	T	S	L	X	F	L	I	T	P	X	H	D	K	P	G	L	L	A	S	V	L	N	T	F	A	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	S	G	G	G	T										S		S											S						S	S		S									S	S			T	T											T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Sequence	N	I	N	L	S	W	I	E	S	R	P	L	K	T	Q	L	G	X	Y	R	F	F	V	Q	A	D	S	A	I	T	T	D	I	K	K	V	I	A	I	L	E	T	L	D	F	K	V	E	X	I	G	A	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T												S	S	S	T	T									S			S														T	T