Fold library entry viewer: c2qmjA_

Added to library: Tue Mar 16 12:11:15 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	N	E	L	E	R	I	N	C	I	P	D	Q	P	P	T	K	A	T	C	D	Q	R	G	C	C	W	N	P	Q	G	A	V	S	V	P	W	C	Y	Y	S	K	N	H	S	Y	H	V	E	G	N	L	V	N	T	N	A	G	F	T	A	R	L	K	N	L	P	S	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G			B	S			S	S	S										T					T	T	S		T	T	S		S					S	S		S											S	S										S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	F	G	S	N	V	D	N	V	L	L	T	A	E	Y	Q	T	S	N	R	F	H	F	K	L	T	D	Q	T	N	N	R	F	E	V	P	H	E	H	V	Q	S	F	S	G	N	A	A	A	S	L	T	Y	Q	V	E	I	S	R	Q	P	F	S	I	K	V	T	R	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		B		S											T	T									T	T	S								S	S						S				S	S		S								T	T								T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	N	R	V	L	F	D	S	S	I	G	P	L	L	F	A	D	Q	F	L	Q	L	S	T	R	L	P	S	T	N	V	Y	G	L	G	E	H	V	H	Q	Q	Y	R	H	D	M	N	W	K	T	W	P	I	F	N	R	D	T	T	P	N	G	N	G	T	N	L	Y	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							G	G	G	S						T	T									S		S							S	S			S	S	S	S				S	S													S	T	T					S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	T	F	F	L	C	L	E	D	A	S	G	L	S	F	G	V	F	L	M	N	S	N	A	M	E	V	V	L	Q	P	A	P	A	I	T	Y	R	T	I	G	G	I	L	D	F	Y	V	F	L	G	N	T	P	E	Q	V	V	Q	E	Y	L	E	L	I	G	R	P	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	T	T												S								T	T	T							S	S	S										S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	S	Y	W	A	L	G	F	H	L	S	R	Y	E	Y	G	T	L	D	N	M	R	E	V	V	E	R	N	R	A	A	Q	L	P	Y	D	V	Q	H	A	D	I	D	Y	M	D	E	R	R	D	F	T	Y	D	S	V	D	F	K	G	F	P	E	F	V	N	E	L	H	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	G	S						S				S														T	T										G	G	G	S	B	T	T	B	T	T				T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	G	Q	K	L	V	I	I	V	D	P	A	I	S	N	N	S	S	S	S	K	P	Y	G	P	Y	D	R	G	S	D	M	K	I	W	V	N	S	S	D	G	V	T	P	L	I	G	E	V	W	P	G	Q	T	V	F	P	D	Y	T	N	P	N	C	A	V	W	W	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T									S								S	S	S												T		B		B		T	T	S	S	S	B						T	T						B		T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	F	E	L	F	H	N	Q	V	E	F	D	G	I	W	I	D	M	N	E	V	S	N	F	V	D	G	S	V	S	G	C	S	T	N	N	L	N	N	P	P	F	T	P	R	I	L	D	G	Y	L	F	C	K	T	L	C	M	D	A	V	Q	H	W	G	K	Q	Y	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S			S						S	T	T	T			S	S	S	B	S	T	T					S	T	T	T	S		S				S		G	G	G		T	T	T	T	S	B		T	T				T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	H	N	L	Y	G	Y	S	M	A	V	A	T	A	E	A	A	K	T	V	F	P	N	K	R	S	F	I	L	T	R	S	T	F	A	G	S	G	K	F	A	A	H	W	L	G	D	N	T	A	T	W	D	D	L	R	W	S	I	P	G	V	L	E	F	N	L	F	G	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G																	S	T	T	B							S	S			T	T	G	G	G	T							S		B	S	S																	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	M	V	G	P	D	I	C	G	F	A	L	D	T	P	E	E	L	C	R	R	W	M	Q	L	G	A	F	Y	P	F	S	R	N	H	N	G	Q	G	Y	K	D	Q	D	P	A	S	F	G	A	D	S	L	L	L	N	S	S	R	H	Y	L	N	I	R	Y	T	L	L	P	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						T		S	B	S															T	T	S	S	S							S	S	S				S	G	G	G	G		T	T																	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	Y	T	L	F	F	R	A	H	S	R	G	D	T	V	A	R	P	L	L	H	E	F	Y	E	D	N	S	T	W	D	V	H	Q	Q	F	L	W	G	P	G	L	L	I	T	P	V	L	D	E	G	A	E	K	V	M	A	Y	V	P	D	A	V	W	Y	D	Y	E	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T				S									T	T		G	G	G	T	T			S					T	T	T								S	T	T		S								S	S					T	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	S	Q	V	R	W	R	K	Q	K	V	E	M	E	L	P	G	D	K	I	G	L	H	L	R	G	G	Y	I	F	P	T	Q	Q	P	N	T	T	T	L	A	S	R	K	N	P	L	G	L	I	I	A	L	D	E	N	K	E	A	K	G	E	L	F	W	D	D	G	E	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B		S			S									T	T								T	T										S	S					T	T	S										T	T	S											S	S	B	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	D	T	V	A	N	K	V	Y	L	L	C	E	F	S	V	T	Q	N	R	L	E	V	N	I	S	Q	S	T	Y	K	D	P	N	N	L	A	F	N	E	I	K	I	L	G	T	E	E	P	S	N	V	T	V	K	H	N	G	V	P	S	T	S	P	T	V	T	Y	D	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	T	T											S	S														T	T											S												T	T	B											T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Sequence	L	K	V	A	I	I	T	D	I	D	L	L	L	G	E	A	Y	T	V	E	W	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						S					T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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