Fold library entry viewer: c2qizA_

Added to library: Tue Mar 16 12:06:58 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	S	E	F	R	S	M	T	A	I	E	D	I	L	Q	I	T	T	D	P	S	D	T	R	G	Y	S	L	L	K	S	E	E	G	V	D	F	I	D	T	L	L	L	Y	Q	L	T	E	N	E	K	L	D	K	P	F	E	Y	L	N	D	C	F	R	R	N	Q	Q	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T												T			S		S			S	S							S				G	G	G											T		T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	I	T	K	N	K	P	N	A	E	S	L	H	S	T	F	Q	E	I	D	R	L	V	I	G	Y	G	V	V	A	L	Q	I	E	N	F	C	M	N	G	A	F	I	N	Y	I	T	G	I	V	S	N	V	N	S	Y	T	D	F	L	S	Q	I	I	Q	R	A	I	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S	S	T	T																						T	T	S	T	T		S	S	S													T	G	G	G	T														T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	T	A	L	D	L	L	N	A	V	F	P	T	L	L	E	Y	C	N	K	H	V	S	H	F	D	L	N	E	S	V	I	Y	N	N	V	L	T	I	F	E	L	F	V	T	F	K	P	I	A	E	I	F	T	K	I	D	G	F	F	A	D	Y	S	C	K	P	Q	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																				S	S	S			S	T	T																	T	S					T	T	G	G	G	S	T	T	S	S			T	T			G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	R	K	T	I	L	G	P	I	L	S	L	S	P	I	E	A	A	V	A	I	R	N	Y	G	D	N	L	L	R	S	K	Q	Q	T	A	M	I	H	E	S	L	Q	A	E	H	K	V	V	I	D	R	L	F	F	I	V	D	K	L	V	R	G	S	L	N	S	R	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	T	T					T			T	T	S									T	T		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	M	I	S	Y	F	A	H	I	A	N	K	N	H	L	R	R	A	D	H	P	P	F	K	E	L	S	S	N	G	F	M	S	N	I	T	L	L	L	V	R	F	S	Q	P	F	L	D	I	S	Y	K	K	I	D	K	I	D	A	N	Y	F	N	N	P	S	L	F	I	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T		G	G	G	G	S	S	S			G	G	G	S																		G	G	G	G	S	T	T		T	T	G	G	G	S		T	T	T	T	S	S			S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	G	E	T	R	L	N	S	D	F	K	E	A	D	A	F	Y	D	K	N	R	K	T	A	D	S	K	P	N	F	I	S	D	C	F	F	L	T	L	T	Y	L	H	Y	G	L	G	G	T	L	S	F	E	E	K	M	G	S	E	I	K	A	L	K	E	E	I	E	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			B	S	S													T	T	T	S		S																				T										T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	K	I	A	A	N	H	D	V	F	A	R	F	I	T	A	Q	L	S	K	M	E	K	A	L	K	T	T	E	S	L	R	F	A	L	Q	G	F	F	A	H	R	S	L	Q	L	E	V	F	D	F	I	C	G	A	S	T	F	L	I	R	V	V	D	P	E	H	E	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T					S																																	T																								S	T	T			T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	F	K	Q	I	K	L	P	L	I	P	D	Q	I	G	V	E	N	V	D	N	A	D	F	L	R	A	H	A	P	V	P	F	K	Y	Y	P	E	F	V	V	E	G	P	V	N	Y	S	L	Y	I	S	K	Y	Q	T	S	P	I	F	R	N	P	R	L	G	S	F	V	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S				S		S	S				S				S	S									T	S		T	T	G	G	G	S	B	T														T	T	S	T	T		S	S	T	T		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	T	M	V	L	R	C	P	E	L	V	S	N	P	H	L	K	G	K	L	V	Q	L	L	S	V	G	A	M	P	L	T	D	N	S	P	G	F	M	M	D	I	F	E	H	D	E	L	V	N	K	N	L	L	Y	A	L	L	D	F	Y	V	I	V	E	K	T	G	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S																						S	S					T	T												T	T												G	G	G				S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	Q	F	Y	D	K	F	N	S	R	Y	S	I	S	I	I	L	E	E	L	Y	Y	K	I	P	S	Y	K	N	Q	L	I	W	Q	S	Q	N	N	A	D	F	F	V	R	F	V	A	R	M	L	N	D	L	T	F	L	L	D	E	G	L	S	N	L	A	E	V	H	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T	S																																																	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	Q	N	E	L	D	N	E	E	D	K	E	L	Q	T	R	L	A	S	A	S	R	Q	A	K	S	S	C	G	L	A	D	K	S	M	K	L	F	E	I	Y	S	K	D	I	P	A	A	F	V	T	P	E	I	V	Y	R	L	A	S	M	L	N	Y	N	L	E	S	L	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T				T	T																																T	T		G	G	G	G	S	S	T	T	T																	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	P	K	C	G	E	L	K	V	K	D	P	Q	S	Y	S	F	N	P	K	D	L	L	K	A	L	T	T	V	Y	I	N	L	S	E	Q	S	E	F	I	S	A	V	A	K	D	E	R	S	F	N	R	N	L	F	V	R	A	V	D	I	L	G	R	K	T	G	L	A	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S				S		G	G	G	G	T																		T	T												T	T	T														T	T	S	S		S	S	T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	E	F	I	E	K	L	L	N	F	A	N	K	A	E	E	Q	R	K	A	D	E	E	E	D	L	E	Y	G	D	V	P	D	E	F	L	D	P	L	M	Y	T	I	M	K	D	P	V	I	L	P	A	S	K	M	N	I	D	R	S	T	I	K	A	H	L	L	S	D	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																														S		G	G	G	B		T	T	T		S	B		S	S					T	T	T														T	T			B
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.
Sequence	D	P	F	N	R	M	P	L	K	L	E	D	V	T	P	N	E	E	L	R	Q	K	I	L	C	F	K	K	Q	K	K	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T			B			G	G	G																		T

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PDB structure

FASTA sequence

Hidden Markov model

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