PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2qb0D_

Fold library id	PDB Header	Molecule	Title
c2qb0D_	PDB header: hydrolase regulator	Chain: D: PDB Molecule: telsam domain - lysozyme chimera;	PDBTitle: structure of the 2tel crystallization module fused to t42 lysozyme with an ala-gly-pro linker.

Links to external resources
Added to library: Tue Mar 16 12:18:36 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S I R L P A H L R L Q P I Y W S R D D V A Q W L K W A E N E F S L R P I D S N T F E M N G K A L L L L T K E D F R Y R S P H S G D V L Y E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G S
G G G
T T
S
T T T T
S
T T
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L Q H I L K Q A G P N I F E M L R I D E G L R L K I Y K D T E G Y Y T I G I G H L L T K S P S L N A A K S E L D K A I G R N T N G V I T K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T S
S S S S
S S S S
S
T T B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E A E K L F C Q D V D A A V R G I L R N A K L K P V Y D S L D C V R R A A L I N M V F Q M G E T G V A G F T N S L R M L Q Q K R W D E A A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T S
T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 .

Sequence N L A K S R W Y N Q T P N R A K R V I T T F R T G T W D A Y K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S S S S G G G

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	I	R	L	P	A	H	L	R	L	Q	P	I	Y	W	S	R	D	D	V	A	Q	W	L	K	W	A	E	N	E	F	S	L	R	P	I	D	S	N	T	F	E	M	N	G	K	A	L	L	L	L	T	K	E	D	F	R	Y	R	S	P	H	S	G	D	V	L	Y	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G	G	S		G	G	G																	T	T		S				T	T	T	T		S						T	T											T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	Q	H	I	L	K	Q	A	G	P	N	I	F	E	M	L	R	I	D	E	G	L	R	L	K	I	Y	K	D	T	E	G	Y	Y	T	I	G	I	G	H	L	L	T	K	S	P	S	L	N	A	A	K	S	E	L	D	K	A	I	G	R	N	T	N	G	V	I	T	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																														S	S	S						T	T					S			S	S	S	S						S	S	S	S		S			T	T	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	A	E	K	L	F	C	Q	D	V	D	A	A	V	R	G	I	L	R	N	A	K	L	K	P	V	Y	D	S	L	D	C	V	R	R	A	A	L	I	N	M	V	F	Q	M	G	E	T	G	V	A	G	F	T	N	S	L	R	M	L	Q	Q	K	R	W	D	E	A	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T		T	T	T							S																						T										T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Sequence	N	L	A	K	S	R	W	Y	N	Q	T	P	N	R	A	K	R	V	I	T	T	F	R	T	G	T	W	D	A	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S						S														S	S	S	G	G	G