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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2q8eB_

Fold library idPDB HeaderMoleculeTitle
c2q8eB_PDB header: oxidoreductaseChain: B: PDB Molecule: jmjc domain-containing histone demethylationPDBTitle: specificity and mechanism of jmjd2a, a trimethyllysine-2 specific histone demethylase


Added to library: Tue Mar 16 13:00:57 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDDLVIPAPIQQLVTGQ
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Known secondary structure (DSSP)
GGGS



TTGGG
TTGGGGS


TT

S
S
SSS
TT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SGLFTQYNIQKKAMTVREFRKIANSDKYCTPRYSEFEELERKYWKNLTFNPPIYGADVNGTLYEKHVDEW
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Known secondary structure (DSSP) TT


STTTS



SSTTSS




S
TT

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKR
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Known secondary structure (DSSP)
TT



TT



TTTTS

TT


GGG
S

GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAES
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Known secondary structure (DSSP) S
TTGGGGS

TT



TT

TT
SSS
 .........290.........300.........310.........320.........330.......
Sequence TNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWKAGKDNTVIDHTL
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Known secondary structure (DSSP)

TT



SS
SSS



S
T








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Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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