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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2q8aA_

Fold library idPDB HeaderMoleculeTitle
c2q8aA_PDB header: immune systemChain: A: PDB Molecule: apical membrane antigen 1;PDBTitle: structure of the malaria antigen ama1 in complex with a2 growth-inhibitory antibody


Added to library: Tue Mar 16 13:10:10 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GNPWTEYMAKYDIEEVHGSGIRVDLGEDAEVAGTQYRLPSGKCPVFGKGIIIENSNTTFLTPVATGNQYL
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Known secondary structure (DSSP)

TTGGG
T
S
SSB


TT


SS
T
TT
SS
TTSB


TT

G
 .........80.........90.........100.........110.........120.........130.........140
Sequence KDGGFAFPPTEPLMSPMTLDEMRHFYKDNKYVKNLDELTLCSRHAGNMIPDNDKNSNYKYPAVYDDKDKK
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Known secondary structure (DSSP) GG

SB



SS

SSTTT
TS
TTS
GGG
TT





TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence CHILYIAAQENNGPRYCNKDESKRNSMFCFRPAKDISFQNYTYLSKNVVDNWEKVCPRKNLQNAKFGLWV
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Known secondary structure (DSSP) BS




B

TTTS


SS

SS




GGGTT
TT

TTS

SBT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DGNCEDIPHVNEFPAIDLFECNKLVFELSASDQPEQHLTDYEKIKEGFKNKNASMIKYKSHGKGYNWGNY
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Known secondary structure (DSSP) TT
S


SSS
B




S

TT

BSSSSB




TT
SS
 .........290.........300.........310......
Sequence NTETQKCEIFNVKPTCLINNSSYIATTALSHPIEVE
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Known secondary structure (DSSP) TTTT
S




TTSSS
SS
B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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