PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2q24A_

Fold library id	PDB Header	Molecule	Title
c2q24A_	PDB header: transcription	Chain: A: PDB Molecule: putative tetr family transcriptional regulator;	PDBTitle: crystal structure of tetr transcriptional regulator sco05202 from streptomyces coelicolor

Links to external resources
Added to library: Tue Mar 16 12:52:41 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N R D K I L A A A V R V F S E E G L D A H L E R I A R E A G V G S G T L Y R N F P T R E A L I E A A Y R N E V A R L C D S V P G L L A E L P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P A E A L R A W T R R F I D Y A T A K L G X A D A L R A V V A S G G D P Y G D S R Q L I Q S A L T A L X D A A A A A G E I R S D I R S T D X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
T T T T S S
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . .

Sequence F A A L A G I A L T S S R P D Q R A Q A E R L L D L V L D G L R P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S G G G T

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	R	D	K	I	L	A	A	A	V	R	V	F	S	E	E	G	L	D	A	H	L	E	R	I	A	R	E	A	G	V	G	S	G	T	L	Y	R	N	F	P	T	R	E	A	L	I	E	A	A	Y	R	N	E	V	A	R	L	C	D	S	V	P	G	L	L	A	E	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T										T	T												S																			T								S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	A	E	A	L	R	A	W	T	R	R	F	I	D	Y	A	T	A	K	L	G	X	A	D	A	L	R	A	V	V	A	S	G	G	D	P	Y	G	D	S	R	Q	L	I	Q	S	A	L	T	A	L	X	D	A	A	A	A	A	G	E	I	R	S	D	I	R	S	T	D	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T										T	T			S		T	T																			T	T	S	S		S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Sequence	F	A	A	L	A	G	I	A	L	T	S	S	R	P	D	Q	R	A	Q	A	E	R	L	L	D	L	V	L	D	G	L	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	G	G	G															T