Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2q1wC_

Fold library idPDB HeaderMoleculeTitle
c2q1wC_PDB header: sugar binding proteinChain: C: PDB Molecule: putative nucleotide sugar epimerase/ dehydratase;PDBTitle: crystal structure of the bordetella bronchiseptica enzyme2 wbmh in complex with nad+


Added to library: Tue Mar 16 14:37:17 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQ
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)


TTTSTT


SS

GGGS


TT

TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence PDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPA
Predicted secondary structure



















































SS confidence





































































Known secondary structure (DSSP)
S




S
TT
TTT
SGGGG
SS
SSSSB
TT




T
 .........150.........160.........170.........180.........190.........200.........210
Sequence NSSYAISKSANEDYLEYSGLDFVTFRLANVVGPRNSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARA
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) T



S
STT


TT


S


 .........220.........230.........240.........250.........260.........270.........280
Sequence TVRAVDGVGHGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGAPSILLDPSRTIQDFGKIEFTP
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) TT



S
S

T
S









B

B


S




 .........290......
Sequence LKETVAAAVAYFREYG
Predicted secondary structure

SS confidence















Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D