Fold library entry viewer: c2q1fA_

Added to library: Tue Mar 16 12:01:28 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	Q	I	V	T	D	E	R	X	F	S	F	E	E	P	Q	L	P	A	C	I	T	G	V	Q	S	Q	L	G	I	S	G	A	H	Y	K	D	G	K	H	S	L	E	W	T	F	E	P	N	G	R	L	E	L	R	K	D	L	K	F	E	K	K	D	P	T	G	K	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S				T	T						S	S	S			T	T												S	S			S	S	T	T																	S									T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	L	S	A	F	I	V	W	I	Y	N	E	Q	P	Q	D	A	A	I	E	F	E	F	L	K	D	G	R	K	C	A	S	F	P	F	G	I	N	F	K	G	W	R	A	A	W	V	C	Y	E	R	D	X	Q	G	T	P	E	E	G	X	N	E	L	R	I	V	A	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S			S	S									T	T													S									T	T	T	T	S						T	T										S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	K	G	R	L	F	I	D	H	L	I	T	A	T	K	V	D	A	R	Q	Q	T	A	D	L	Q	V	P	F	V	N	A	G	T	T	N	H	W	L	V	L	Y	K	H	S	L	L	K	P	D	I	E	L	T	P	V	S	D	K	Q	R	Q	E	X	K	L	L	E	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																	T	T		B				S	S		T	T	T	T	T	T				T	T	T							T					S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	R	D	X	I	Y	T	K	G	K	V	T	E	K	E	A	E	T	I	R	K	K	Y	D	L	Y	Q	I	T	Y	K	D	G	Q	V	S	G	V	P	V	F	X	V	R	A	S	E	A	Y	E	R	X	I	P	D	W	D	K	D	X	L	T	K	X	G	I	E	X	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T	T						T	T					S			B		G	G	G	G	G	G	S	T	T	T		T	T			T	T					T	T		B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	F	D	L	X	K	R	I	A	V	A	Y	N	N	S	E	A	G	S	P	I	R	K	E	X	R	R	K	F	L	A	X	Y	D	H	I	T	D	Q	G	V	A	Y	G	S	C	W	G	N	I	H	H	Y	G	Y	S	V	R	G	L	Y	P	A	Y	F	L	X	K	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	S		T	T																						T		S	T	T			T	T	B		T	T	G	G	G	T	T	T	T							T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	R	E	E	G	K	L	L	E	A	E	R	T	L	R	W	Y	A	I	T	N	E	V	Y	P	K	P	E	G	N	G	I	D	X	D	S	F	N	T	Q	T	T	G	R	I	A	S	I	L	X	X	E	D	T	P	E	K	L	Q	Y	L	K	S	F	S	R	W	I	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T													T	T	G	G	G	G	S	S			S	S	S										T										T	S		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	C	R	P	A	P	G	L	A	G	S	F	K	V	D	G	G	A	F	H	H	R	N	N	Y	P	A	Y	A	V	G	G	L	D	G	A	T	N	X	I	Y	L	F	S	R	T	S	L	A	V	S	E	L	A	H	R	T	V	K	D	V	L	L	A	X	R	F	Y	C	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S				T	T		S	S	B		T	T	S		B			T	T																							S	S	T	T																					S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	L	N	F	P	L	S	X	S	G	R	H	P	D	G	K	G	K	L	V	P	X	H	Y	A	I	X	A	I	A	G	T	P	D	G	K	G	D	F	D	K	E	X	A	S	A	Y	L	R	L	V	S	S	D	X	P	K	V	S	N	A	Q	E	R	K	I	A	K	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	B			G	G	G		T	T		T	T	S			B											T	T			T	T	S			S	S												T									S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	V	E	N	G	F	R	A	E	P	D	P	Q	G	N	L	S	L	G	Y	G	C	V	S	V	Q	R	R	E	N	W	S	A	V	A	R	G	H	S	R	Y	L	W	A	A	E	H	Y	L	G	H	N	L	Y	G	R	Y	L	A	H	G	S	L	Q	I	L	T	A	P	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T														T	T	T	T							T	T										S	S	S		S					T	T	B		S	S		T	T	T	T	S	S								S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Q	T	V	T	P	T	T	S	G	W	Q	Q	E	G	F	D	W	N	R	I	P	G	V	T	S	I	H	L	P	L	D	L	L	K	A	N	V	L	N	V	D	T	F	S	G	X	E	E	X	L	Y	S	D	E	A	F	A	G	G	L	S	Q	G	K	X	N	G	N	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				T	T	T	T	T			S	T	T			T	T			T	T												S							S	T	T			S							S										T	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	X	K	L	H	E	H	D	K	Y	N	G	T	H	R	A	R	K	S	F	H	F	I	D	G	X	I	V	C	L	G	S	D	I	E	N	T	N	X	D	Y	P	T	E	T	T	I	F	Q	L	A	V	T	D	K	A	A	H	D	Y	W	K	N	N	A	G	E	G	K	V	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S		T	T											T	T														S	S	S													S							T	S	S					S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	X	D	H	L	G	T	G	Y	Y	V	P	V	A	A	R	F	E	K	N	F	P	Q	Y	S	R	X	Q	D	T	G	K	E	T	K	G	D	W	V	S	L	I	I	D	H	G	K	A	P	K	A	G	S	Y	E	Y	A	I	L	P	G	T	D	R	K	T	X	T	A	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S							S															T	T	T																		S		S	S									S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	K	K	P	A	Y	S	V	L	Q	Q	D	R	N	A	H	I	L	E	S	P	S	D	R	I	T	S	Y	V	L	F	E	T	P	Q	S	L	L	P	G	G	L	L	Q	R	T	D	T	S	C	L	V	X	V	R	K	E	S	A	D	K	V	L	L	T	V	A	Q	P	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		S							S	S	S							T	T	T	T							S	S				S			T	T	S	S					S	S	S								S	S	S	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	A	L	Y	R	G	P	S	D	E	A	F	D	K	D	G	K	R	X	E	R	S	I	Y	S	R	P	W	I	D	N	E	S	G	E	I	P	V	T	V	T	L	K	G	R	W	K	V	V	E	T	P	Y	C	K	V	V	S	E	D	K	K	Q	T	V	L	R	F	L	C	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		S	S					B		S	S	S		B					G	G	G		T	T	T	T														S							B	T	T								S	S
	.	.	.	.	.	.	.	.	.	990	.
Sequence	D	G	A	S	Y	E	V	E	L	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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