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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2q13A_

Fold library idPDB HeaderMoleculeTitle
c2q13A_PDB header: protein transportChain: A: PDB Molecule: dcc-interacting protein 13 alpha;PDBTitle: crystal structure of bar-ph domain of appl1


Added to library: Tue Mar 16 12:39:39 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDKLPIEETLEDSPQTRSLLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRF
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Known secondary structure (DSSP)




GGGTTT

TTTTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence PLDEVMSSTLQQFSKVIDELSSCHAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINR
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Known secondary structure (DSSP)



TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YSRLSKKRENDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSE
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Known secondary structure (DSSP) T

SSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence NLNEQLEEFLANIGTSVQNVRREMDSDIETMQQTIEDLEVASDPLYVPDPDPTKFPVNRNLTRKAGYLNA
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Known secondary structure (DSSP) S
GGGSSSS

TTTS





S

 .........290.........300.........310.........320.........330.........340.........350
Sequence RTWDRQFYFTQGGNLMSQARGDVAGGLAMDIDNCSVMAVDCEDRRYCFQITSFDGKKSSILQAESKKDHE
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Known secondary structure (DSSP)


TT
SS
SS

TT


TT
SS
TTS
B



SS
 .........360....
Sequence EWICTINNISKQIY
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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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