PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2pz0B_

Fold library id	PDB Header	Molecule	Title
c2pz0B_	PDB header: hydrolase	Chain: B: PDB Molecule: glycerophosphoryl diester phosphodiesterase;	PDBTitle: crystal structure of glycerophosphodiester2 phosphodiesterase (gdpd) from t. tengcongensis

Links to external resources
Added to library: Tue Mar 16 13:15:47 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K T L V I A H R G D S K N V P E N T I A A F K R A M E L G A D G I E L D V Q L T K D G H L V V I H D E T V D R T T N G E G F V K D F T L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T T S
T T S T
S
T T
S S S B S T T T S S
S B G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E I K K L D A G I K F G E K F A G E R I P T L Y E V F E L I G D K D F L V N I E I K S G I V L Y P G I E E K L I K A I K E Y N F E E R V I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S T T T
G G G T T
B T T S
S S S
T T T T
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S S F N H Y S L R D V K K M A P H L K I G L L Y Q C G L V E P W H M A L R M E A Y S L H P F Y F N I I P E L V E G C K K N G V K L F P W T V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S
S
S S T T T
S B G G G
T T T
B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . .

Sequence D R K E D M E R M I K A G V D G I I T D D P E T L I N L V R K G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T
S S
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	T	L	V	I	A	H	R	G	D	S	K	N	V	P	E	N	T	I	A	A	F	K	R	A	M	E	L	G	A	D	G	I	E	L	D	V	Q	L	T	K	D	G	H	L	V	V	I	H	D	E	T	V	D	R	T	T	N	G	E	G	F	V	K	D	F	T	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	T	T	T	S		T	T	S											T		S										T	T							S	S	S	B	S	T	T	T	S	S			S	B	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	I	K	K	L	D	A	G	I	K	F	G	E	K	F	A	G	E	R	I	P	T	L	Y	E	V	F	E	L	I	G	D	K	D	F	L	V	N	I	E	I	K	S	G	I	V	L	Y	P	G	I	E	E	K	L	I	K	A	I	K	E	Y	N	F	E	E	R	V	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S		S	S	T	T	T		G	G	G	T	T					B									T	T	S											S	S	S			T	T												T	T		T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	S	F	N	H	Y	S	L	R	D	V	K	K	M	A	P	H	L	K	I	G	L	L	Y	Q	C	G	L	V	E	P	W	H	M	A	L	R	M	E	A	Y	S	L	H	P	F	Y	F	N	I	I	P	E	L	V	E	G	C	K	K	N	G	V	K	L	F	P	W	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S													T	T	S								S			S	S	T							T	T		S					B	G	G	G											T	T	T						B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Sequence	D	R	K	E	D	M	E	R	M	I	K	A	G	V	D	G	I	I	T	D	D	P	E	T	L	I	N	L	V	R	K	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S											T		S					S										T	T	T