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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2pwzG_

Fold library idPDB HeaderMoleculeTitle
c2pwzG_PDB header: oxidoreductaseChain: G: PDB Molecule: malate dehydrogenase;PDBTitle: crystal structure of the apo form of e.coli malate2 dehydrogenase


Added to library: Tue Mar 16 14:21:24 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGA
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Known secondary structure (DSSP)
TTTSS
TT
SSTTTS
SS
SS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDK
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Known secondary structure (DSSP) S






SS


TTS
SS
T


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence NKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVADLTKRIQNAG
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Known secondary structure (DSSP) TS

T

GGG




SSGGG
GGG
TT



T
 .........220.........230.........240.........250.........260.........270.........280
Sequence TEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKS
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Known secondary structure (DSSP) TTTS
S

TT
SS

SSS
STT

 .........290.........300.........310..
Sequence IGTLSAFEQNALEGMLDTLKKDIALGEEFVNK
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Known secondary structure (DSSP)






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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