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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2pssC_

Fold library idPDB HeaderMoleculeTitle
c2pssC_PDB header: transferaseChain: C: PDB Molecule: spermidine synthase;PDBTitle: the structure of plasmodium falciparum spermidine synthase2 in its apo-form


Added to library: Tue Mar 16 14:00:40 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KKWFSEFSIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVP
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Known secondary structure (DSSP)



TTSTT


SS
SSS
TTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence MTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDAS
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Known secondary structure (DSSP) SSS


TT
T
TT


S

GGGGSTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence KFLENVTNTYDVIIVDSSNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIP
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Known secondary structure (DSSP) TT

S






TTT
TT
S
T
 .........220.........230.........240.........250.........260.........
Sequence TYPCGCIGILCCSKTDTGLTKPNKKLESKEFADLKYYNYENHSAAFKLPAFLLKEIENI
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Known secondary structure (DSSP) TSGGGSSTT
SSS
SS


SGGGTT
SS

TT


TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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