Fold library entry viewer: c2pmzQ_

Added to library: Tue Mar 16 12:04:52 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	N	I	K	G	I	K	F	G	I	L	S	P	D	E	I	R	K	M	S	V	T	A	I	I	T	P	M	D	P	R	L	G	V	I	E	P	G	Q	K	C	P	T	C	G	N	T	L	G	N	C	P	G	H	F	G	H	I	E	L	V	R	P	V	I	H	V	G	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					S									S	S	S				S	S		S		S	S	S	S				S	S												S	S					T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	H	I	Y	E	F	L	K	A	K	L	T	P	S	D	I	R	E	R	L	E	K	I	P	D	S	D	V	E	I	L	G	Y	D	P	T	T	S	R	P	E	W	M	I	L	T	V	L	P	V	P	P	I	T	I	R	P	S	E	D	D	L	T	H	K	L	V	D	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T													T	T	S												T	T	T			T	T	T	S	S		S	S						S	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	I	N	E	R	L	K	E	S	I	D	A	G	A	P	Q	L	I	I	E	D	L	W	D	L	L	Q	Y	H	V	A	T	Y	F	D	N	E	I	P	G	L	P	P	S	K	H	R	S	G	R	P	L	R	T	L	A	Q	R	L	K	G	K	E	G	R	F	R	G	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S			T	T	T																		S			S	S	S						T	T	S	S					G	G	G	T	T		S	T	T	S	S					T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	G	K	R	V	D	F	S	S	R	T	V	I	S	P	D	P	N	I	S	I	D	E	V	G	V	P	E	I	I	A	K	T	L	T	V	P	E	R	I	T	P	W	N	I	E	K	L	R	Q	F	V	I	N	G	P	D	K	W	P	G	A	N	Y	V	I	R	P	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					T	T										S	S	S		S	S												S								T	T	T											T	T	T	S	S	S			S					T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	R	I	D	L	R	Y	V	K	D	R	K	E	L	A	S	T	L	A	P	G	Y	I	I	E	R	H	L	I	D	G	D	I	V	L	F	N	R	Q	P	S	L	H	R	I	S	M	M	A	H	R	V	R	V	L	K	G	L	T	F	R	L	N	L	L	V	C	P	P	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S		S		T	T	T							T	T									T	T								S	S			S	G	G	G										S	S	S	S					G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	A	D	F	D	G	D	E	M	N	L	H	V	P	Q	S	E	E	A	I	A	E	A	K	E	I	M	L	V	H	K	N	I	I	T	P	R	Y	G	G	P	I	I	G	A	A	Q	D	Y	I	S	G	A	Y	L	L	T	V	K	T	T	L	L	T	K	E	E	A	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			S	S	S										S											S	B	S	G	G	G				T	T	T	T			S	S				S										S	S	T	T			B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	L	G	V	A	D	V	K	I	D	L	G	E	P	A	I	L	A	P	R	E	Y	Y	T	G	K	Q	V	I	S	A	F	L	P	K	D	F	N	F	H	G	Q	A	N	V	S	S	G	P	R	L	C	K	N	E	D	C	P	H	D	S	Y	V	V	I	K	N	G	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S									S	B		S	S	S		B	B							T	T	T	S		T	T								S	S			S	T	T				S	S			S	S	S		S				S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	E	G	V	F	D	K	K	A	I	G	N	Q	Q	P	E	S	I	L	H	W	L	I	K	E	Y	S	D	E	Y	G	K	W	L	M	D	N	L	F	R	V	F	I	R	F	V	E	L	Q	G	F	T	M	R	L	E	D	V	S	L	G	D	D	V	K	K	E	I	Y	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S				S					S	S		T	T	T									T	S		T	T									S									T	T	T						S	T	T	T				T	T							T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	I	D	R	A	K	V	E	V	D	N	L	I	Q	K	Y	K	N	G	E	L	E	P	I	P	G	R	T	L	E	E	S	L	E	N	Y	I	L	D	T	L	D	K	L	R	S	T	A	G	D	I	A	S	K	Y	L	D	P	F	N	F	A	Y	V	M	A	R	T	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																	T	T					B	T	T	B																										T	T	T	S		T	T	S						S	S	S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	R	G	S	V	L	N	I	T	Q	M	A	A	M	L	G	Q	Q	S	V	R	G	E	R	I	K	R	G	Y	M	T	R	T	L	P	H	F	K	P	Y	D	I	S	P	E	A	R	G	F	I	Y	S	S	F	R	T	G	L	K	P	T	E	L	F	F	H	A	A	G	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S											S							B	T	T	B					S	S	S	S		S	S	T	T	S		S	S				T	T	S	S	S						T	T	T				T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	G	L	V	D	T	A	V	R	T	S	Q	S	G	Y	M	Q	R	R	L	I	N	A	L	S	D	L	R	A	E	Y	D	G	T	V	R	S	L	Y	G	E	V	V	Q	V	A	Y	G	D	D	G	V	F	P	M	Y	S	A	H	G	K	T	V	D	V	N	R	I	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T													T	T	S		S					T	T	S					S	S	S					S	S	G	G	G	S				G	G	G	S	S	S	S	S
	.	.	.	.	.	.
Sequence	R	V	V	G	W	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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