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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2pmvA_

Fold library idPDB HeaderMoleculeTitle
c2pmvA_PDB header: transport proteinChain: A: PDB Molecule: gastric intrinsic factor;PDBTitle: crystal structure of human intrinsic factor- cobalamin complex at 2.62 a resolution


Added to library: Thu Jan 10 06:43:54 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SCSVPSAQEPLVNGIQVLMENSVTSSAYPNPSILIAMNLAGAYNLKAQKLLTYQLMSSDNNDLTIGHLGL
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Known secondary structure (DSSP)




TTTTT

SSS




S
T

GGG

 .........80.........90.........100.........110.........120.........130.........140
Sequence TIMALTSSCRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLAILALCQKNSEATLPIAVRFAKTLLAN
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Known secondary structure (DSSP) TT


TT


S
TT

GGGG

 .........150.........160.........170.........180.........190.........200.........210
Sequence SSPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYSTGLAMQALS
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Known secondary structure (DSSP)
S


TT

TT

SSTTSB
TTS
BSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VTPEPSKKEWNCKKTTDMILNEIKQGKFHNPMSIAQILPSLKGKTYLDVPQVTCSPDTSASNITVIYTIN
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Known secondary structure (DSSP)
SS

SS


TTTTT
STT

GGGGGG

SS





S
 .........290.........300.........310.........320.........330.........340.........350
Sequence NQLRGVELLFNETINVSVKSGSVLLVVLEEAQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKTYWQFL
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Known secondary structure (DSSP)


SS





SSS
S
S

S

TTSS
B

GGGT
 .........360.........370........
Sequence SGVTPLNEGVADYIPFNHEHITANFTQY
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Known secondary structure (DSSP) TT
SS
TTT



TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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