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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2pm9A_

Fold library idPDB HeaderMoleculeTitle
c2pm9A_PDB header: protein transportChain: A: PDB Molecule: protein transport protein sec31;PDBTitle: crystal structure of yeast sec13/31 vertex element of the2 copii vesicular coat


Added to library: Tue Mar 16 12:10:33 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNN
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Known secondary structure (DSSP)
S
B

B
SSSS
B
BSS


SS






SSSGGG
S
S




SS

SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTES
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Known secondary structure (DSSP) S
SSS


SSTTS





SSS



SSSTTB
SSS
B
BTTTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSV
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Known secondary structure (DSSP) TTT


B



S

SS




SS
TTSSSS
TTTT




SS




 .........220.........230.........240.........250.........260.........270.........280
Sequence VEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLL
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Known secondary structure (DSSP)
SS
TT

SSS



TTSTTS
SB


S

SS

SS
SS
SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence WNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDESKEKPSVFHLQAPTW
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Known secondary structure (DSSP)
SSS


SSS




TT
TT

SSSS




SS



S


SS




ST
 .........360.........370.........380....
Sequence YGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS
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Known secondary structure (DSSP) T


S


TTT
B
TTSS
B

B





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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