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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2pk3B_

Fold library idPDB HeaderMoleculeTitle
c2pk3B_PDB header: oxidoreductaseChain: B: PDB Molecule: gdp-6-deoxy-d-lyxo-4-hexulose reductase;PDBTitle: crystal structure of a gdp-4-keto-6-deoxy-d-mannose2 reductase


Added to library: Tue Mar 16 12:35:16 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLA
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Known secondary structure (DSSP)
TTTSTTT
S
TT


TT

TT


S

 .........80.........90.........100.........110.........120.........130.........140
Sequence AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPY
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Known secondary structure (DSSP) S


TT
T


GGGTBS

GGG
SB
TTS

B

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence GVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRD
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Known secondary structure (DSSP)



TT

SSSTTSS
S

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FTDVRDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSN
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Known secondary structure (DSSP)

TT
S
S
SSS


GGG

SS

SB

B

 .........290.........300.........
Sequence KRLKDSTGWKPRIPLEKSLFEILQSYRQA
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Known secondary structure (DSSP)




S
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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