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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2pffD_

Fold library idPDB HeaderMoleculeTitle
c2pffD_PDB header: transferaseChain: D: PDB Molecule: fatty acid synthase subunit alpha;PDBTitle: structural insights of yeast fatty acid synthase


Added to library: Wed Jan 9 21:22:38 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)




TTSS

TTSSTTTSTTTTTTT

S
S
SS

TT
SS
SSSSTTTTTSSTTTSS
S

S
S
S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) SSSTTSSSS


SS
GGGTSSTTTTTTTSS
SS

SSSSSSTTTSTT


SSSTTSSTTTTTSSS


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)

STTTTSSTTTSSSSSSSTTTT







SSSSSSTTT

GGGSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) S
TTSS



S





TTSSTTTTSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TTTTTTTTT



TT
STSSTT







STTTS

TTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TTTTT



SSTTTTSTTS







S









STT




S



TT

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTFKDKYVLITGAGKGSIG
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Known secondary structure (DSSP) S
SSS
S
SS





SSS




TTSSS




S


S
SSSST
 .........500.........510.........520.........530.........540.........550.........560
Sequence AEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNG
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Known secondary structure (DSSP) T

SS
STTTTTTTTTT

TT



SSSTTS
TTSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence GLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN
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Known secondary structure (DSSP) S













SB
SSS
TTTTT
TTS





S
 .........640.........650.........660.........670.........680.........690.........700
Sequence HGTFGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQK
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Known secondary structure (DSSP) TTTSS
BTTTTTTSS
TTT











SSS
TTTT
STTTSSSS






 .........710.........720.........730.........740.........750.........760.........770
Sequence EMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKLRKELVETSEVRKAVSIETALEHKVVN
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Known secondary structure (DSSP) TTTSTTTTS





S
SGGGSSSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence GNSADAAYAPRANIQLDFPELKPYKQVKQIAPAELEGLLDLERVIVVTGFAEVGPWGSARTRWEMEAFGE
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Known secondary structure (DSSP)























TTTTTTT
SSSS
SS

SSSSTTTSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence FSLEGCVEMAWIMGFISYHNGNLKGRPYTGWVDSKTKEPVDDKDVKAKYETSILEHSGIRLIEPELFNGY
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Known secondary structure (DSSP)
STTS



STTTT
SSSS


S

SSSSTTS


TTTSSSSSSSGGGTTTSSSS

SSS
 .........920.........930.........940.........950.........960.........970.........980
Sequence NPEKKEMIQEVIVEEDLEPFEASKETAEQFKHQHGDKVDIFEIPETGEYSVKLLKGATLYIPKALRFDRL
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Known secondary structure (DSSP) SSS

SSS






S







TTS
TTS





SSS





TT









 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence VAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGV
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Known secondary structure (DSSP) SS
S








SS

TTTBTTB
SSTTTTTT
SSGGGGGGGT

S
S






S


 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence SALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKA
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Known secondary structure (DSSP) SSSSSS




STT
TSS











TTTTTTTT
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence RICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLAL
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Known secondary structure (DSSP) S
B








TTTTTTTTTTS
S

TTTTTTSS

SSSS

SSSSS






S


S
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence KMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVE
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Known secondary structure (DSSP) SSS















SSS



SSSSSSSSS



SS
SS

S
TT

S
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence NELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTID
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Known secondary structure (DSSP) SSSS
SSTTTTTSSSSS
TT

STTSS
SSTT
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence DLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGI
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Known secondary structure (DSSP)









S
SSSSTTTTTTTGGGTGGG


TT







TTTT


SSTSTT

 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence IPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPDYLYGAITEDRYNEYV
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Known secondary structure (DSSP)



S

S


TT

SS



S
TT

SSSSSS







STT






SSS


S
SSSTT
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence AKVSAREKSAYKFFHNGMIYNKLFVSKEHAPYTDELEEDVYLDPLARVSKDKKSGSLTFNSKNIQSKDSY
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Known secondary structure (DSSP) TTTTTTTT
SS



S
SS
TTT








SSSS


SSSS
SS
STTT
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) T
SSTTTSSSSTTTTTTSS

S






GGGSSSSTTTSSSSS
SGGGSSSSSSS
SSSSTTT
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TTTSSSSSSSSS



SS




B

SSSSB



SS

STTSSSSTTTS
S






TT


 ...
Sequence XXX
Predicted secondary structure


SS confidence


Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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