PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2pcjB_

Fold library id	PDB Header	Molecule	Title
c2pcjB_	PDB header: hydrolase	Chain: B: PDB Molecule: lipoprotein-releasing system atp-binding protein	PDBTitle: crystal structure of abc transporter (aq_297) from aquifex2 aeolicus vf5

Links to external resources
Added to library: Tue Mar 16 13:36:42 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A E I L R A E N I K K V I R G Y E I L K G I S L S V K K G E F V S I I G A S G S G K S T L L Y I L G L L D A P T E G K V F L E G K E V D Y T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T S
T T S S
S T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N E K E L S L L R N R K L G F V F Q F H Y L I P E L T A L E N V I V P M L K M G K P K K E A K E R G E Y L L S E L G L G D K L S R K P Y E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S
T T
T T
T T
T T
G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S G G E Q Q R V A I A R A L A N E P I L L F A D E P T G N L D S A N T K R V M D I F L K I N E G G T S I V M V T H E R E L A E L T H R T L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S T T T T S
T T
S
T T S S

. . . . . . . . . 220 . . .

Sequence M K D G K V V G E I T R V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	E	I	L	R	A	E	N	I	K	K	V	I	R	G	Y	E	I	L	K	G	I	S	L	S	V	K	K	G	E	F	V	S	I	I	G	A	S	G	S	G	K	S	T	L	L	Y	I	L	G	L	L	D	A	P	T	E	G	K	V	F	L	E	G	K	E	V	D	Y	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T													T	T									T	T	S										T	T	S	S			S							T	T					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	E	K	E	L	S	L	L	R	N	R	K	L	G	F	V	F	Q	F	H	Y	L	I	P	E	L	T	A	L	E	N	V	I	V	P	M	L	K	M	G	K	P	K	K	E	A	K	E	R	G	E	Y	L	L	S	E	L	G	L	G	D	K	L	S	R	K	P	Y	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S	S					T	T	S													T	T																	T	T		T	T		T	T			G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	G	G	E	Q	Q	R	V	A	I	A	R	A	L	A	N	E	P	I	L	L	F	A	D	E	P	T	G	N	L	D	S	A	N	T	K	R	V	M	D	I	F	L	K	I	N	E	G	G	T	S	I	V	M	V	T	H	E	R	E	L	A	E	L	T	H	R	T	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T			S						S	T	T	T	T	S																		T	T								S						T	T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.
Sequence	M	K	D	G	K	V	V	G	E	I	T	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T