PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2p0yA_

Fold library id	PDB Header	Molecule	Title
c2p0yA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: hypothetical protein lp_0780;	PDBTitle: crystal structure of q88yi3_lacpl from lactobacillus2 plantarum. northeast structural genomics consortium target3 lpr6

Links to external resources
Added to library: Tue Mar 16 12:41:10 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R P K I V V I G G G T G L P V V L N G L R K Q A V D I T A V V T I R N V X V A L S S W P D L Y K D I F Q G N L I G V F D A V Q E L S N X X Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S S S
S T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V D G H V Y P A L T L H G K F S D G T H K S L E R V W V T P Q A V Q P V I D A I X A A D Q I V L G P G S L F T S I L P N L T I G N I G R A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
S
S S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence C E S D A E V V Y I C N I X T G E T D N F S D A D H V R V L N R H L I N T V L V N T E K V P E D Y X D F H S K Q V S H D F R G L R E Q N C R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S B
S T T
B T
S
B
B
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240

Sequence V I S S N F L K L H D G D Q V V A E L X N L V G H S D V F R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	P	K	I	V	V	I	G	G	G	T	G	L	P	V	V	L	N	G	L	R	K	Q	A	V	D	I	T	A	V	V	T	I	R	N	V	X	V	A	L	S	S	W	P	D	L	Y	K	D	I	F	Q	G	N	L	I	G	V	F	D	A	V	Q	E	L	S	N	X	X	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G											S	S	S																				S						T																		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	D	G	H	V	Y	P	A	L	T	L	H	G	K	F	S	D	G	T	H	K	S	L	E	R	V	W	V	T	P	Q	A	V	Q	P	V	I	D	A	I	X	A	A	D	Q	I	V	L	G	P	G	S	L	F	T	S	I	L	P	N	L	T	I	G	N	I	G	R	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S													S	S																											S						S	S											S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	E	S	D	A	E	V	V	Y	I	C	N	I	X	T	G	E	T	D	N	F	S	D	A	D	H	V	R	V	L	N	R	H	L	I	N	T	V	L	V	N	T	E	K	V	P	E	D	Y	X	D	F	H	S	K	Q	V	S	H	D	F	R	G	L	R	E	Q	N	C	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S								S	B				S	T	T		B											T										S													B		B								T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence	V	I	S	S	N	F	L	K	L	H	D	G	D	Q	V	V	A	E	L	X	N	L	V	G	H	S	D	V	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S															T	T	T