PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2ow8f_

Fold library id	PDB Header	Molecule	Title
c2ow8f_	PDB header: ribosome	Chain: F: PDB Molecule:	PDBTitle: crystal structure of a 70s ribosome-trna complex reveals2 functional interactions and rearrangements. this file,3 2ow8, contains the 30s ribosome subunit, two trna, and4 mrna molecules. 50s ribosome subunit is in the file 1vsa.

Links to external resources
Added to library: Tue Mar 16 13:53:54 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D F E E K M I L I R R T A R M Q A G G R R F R F G A L V V V G D R Q G R V G L G F G K A P E V P L A V Q K A G Y Y A R R N M V E V P L Q N G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S S S
S S S
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T I P H E I E V E F G A S K I V L K P A A P G T G V I A G A V P R A I L E L A G V T D I L T K E L G S R N P I N I A Y A T M E A L R Q L R T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
B
S T T B
B
T T T
B
S T T
S S
B
B
B
T

. . . . . . . . . 150

Sequence K A D V E R L R K G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	F	E	E	K	M	I	L	I	R	R	T	A	R	M	Q	A	G	G	R	R	F	R	F	G	A	L	V	V	V	G	D	R	Q	G	R	V	G	L	G	F	G	K	A	P	E	V	P	L	A	V	Q	K	A	G	Y	Y	A	R	R	N	M	V	E	V	P	L	Q	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S	S														S	S	S										S	S															S							S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	I	P	H	E	I	E	V	E	F	G	A	S	K	I	V	L	K	P	A	A	P	G	T	G	V	I	A	G	A	V	P	R	A	I	L	E	L	A	G	V	T	D	I	L	T	K	E	L	G	S	R	N	P	I	N	I	A	Y	A	T	M	E	A	L	R	Q	L	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S			B			S	T	T	B			B						T	T	T			B			S								T	T			S	S		B		B			B																	T
	.	.	.	.	.	.	.	.	.	150
Sequence	K	A	D	V	E	R	L	R	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T