Fold library entry viewer: c2ot8B_

Added to library: Tue Mar 16 13:21:29 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	G	L	Q	Q	I	L	Q	L	L	K	E	S	Q	S	P	D	T	T	I	Q	R	T	V	Q	Q	K	L	E	Q	L	N	N	N	Y	L	I	F	V	L	T	K	L	K	R	S	L	S	G	L	I	L	K	N	N	V	K	A	H	F	Q	N	F	P	N	G	V	T	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	G	G	G					T	T	T	S	S			T	T	T															S	S											S													S	T	T	S		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	K	S	E	C	L	N	N	I	G	D	S	S	P	L	I	R	A	T	V	G	I	L	I	T	T	I	A	S	K	G	E	L	Q	N	W	P	D	L	L	P	K	L	C	S	L	L	D	S	E	D	Y	N	T	C	E	G	A	F	G	A	L	Q	K	I	C	E	D	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T	T		S	S																	T	T	T	T	T	T		S	T						T	T	T	T	S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	P	L	N	I	M	I	P	K	F	L	Q	F	F	K	H	S	S	P	K	I	R	S	H	A	V	A	C	V	N	Q	F	I	I	S	R	T	Q	A	L	M	L	H	I	D	S	F	I	E	N	L	F	A	L	A	G	D	E	E	P	E	V	R	K	N	V	C	R	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	G								T	T		S													G	G	G	T	T	T	T							T												S	S		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	M	L	L	E	V	R	M	D	R	L	L	P	H	M	H	N	I	V	E	Y	M	L	Q	R	T	Q	D	Q	D	E	N	V	A	L	E	A	C	E	F	W	L	T	L	A	E	Q	P	I	C	K	D	V	L	V	R	H	L	P	K	L	I	P	V	L	V	N	G	M	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												G	G	G													T		S	S																T	S	T	T					G	G	G	T												T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	S	D	I	D	I	I	L	L	K	D	T	I	S	D	W	N	L	R	K	C	S	A	A	A	L	D	V	L	A	N	V	Y	R	D	E	L	L	P	H	I	L	P	L	L	K	E	L	L	F	H	H	E	W	V	V	K	E	S	G	I	L	V	L	G	A	I	A	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T												S	S																	S		G	G	G													S		S	S														T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	C	M	Q	G	M	I	P	Y	L	P	E	L	I	P	H	L	I	Q	C	L	S	D	K	K	A	L	V	R	S	I	T	C	W	T	L	S	R	Y	A	H	W	V	V	S	Q	P	P	D	T	Y	L	K	P	L	M	T	E	L	L	K	R	I	L	D	S	N	K	R	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G												T	T		S	S													T	T							S		T	T	T	T													T		S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	A	A	C	S	A	F	A	T	L	E	E	E	A	C	T	E	L	V	P	Y	L	A	Y	I	L	D	T	L	V	F	A	F	S	K	Y	Q	H	K	N	L	L	I	L	Y	D	A	I	G	T	L	A	D	S	V	G	H	H	L	N	K	P	E	Y	I	Q	M	L	M	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															G	G	G	G	G	G	G																																			G	G	G	G		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	L	I	Q	K	W	N	M	L	K	D	E	D	K	D	L	F	P	L	L	E	C	L	S	S	V	A	T	A	L	Q	S	G	F	L	P	Y	C	E	P	V	Y	Q	R	C	V	N	L	V	Q	K	T	L	A	Q	A	M	L	N	N	A	Q	P	D	Q	Y	E	A	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		T	T		T	T	S														S	S	G	G	G																													T	T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	D	F	M	I	V	A	L	D	L	L	S	G	L	A	E	G	L	G	G	N	I	E	Q	L	V	A	R	S	N	I	L	T	L	M	Y	Q	C	M	Q	D	K	M	P	E	V	R	Q	S	S	F	A	L	L	G	D	L	T	K	A	C	F	Q	H	V	K	P	C	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																		G	G	G	G						T	S													S	S																							G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	F	M	P	I	L	G	T	N	L	N	P	E	F	I	S	V	C	N	N	A	T	W	A	I	G	E	I	S	I	Q	M	G	I	E	M	Q	P	Y	I	P	M	V	L	H	Q	L	V	E	I	I	N	R	P	N	T	P	K	T	L	L	E	N	T	A	I	T	I	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T			T	T	S																			G	G	G	G	G	G	G															T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	G	Y	V	C	P	Q	E	V	A	P	M	L	Q	Q	F	I	R	P	W	C	T	S	L	R	N	I	R	D	N	E	E	K	D	S	A	F	R	G	I	C	T	M	I	S	V	N	P	S	G	V	I	Q	D	F	I	F	F	C	D	A	V	A	S	W	I	N	P	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G													T	T	S		S																T	T							T	T												S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.
Sequence	D	L	R	D	M	F	C	K	I	L	H	G	F	K	N	Q	V	G	D	E	N	W	R	R	F	S	D	Q	F	P	L	P	L	K	E	R	L	A	A	F	Y	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T	T	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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