PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2oqjB_

Fold library id	PDB Header	Molecule	Title
c2oqjB_	PDB header: immune system	Chain: B: PDB Molecule: fab 2g12 heavy chain;	PDBTitle: crystal structure analysis of fab 2g12 in complex with2 peptide 2g12.1

Links to external resources
Added to library: Tue Mar 16 12:52:24 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E V Q L V E S G G G L V K A G G S L I L S C G V S N F R I S A H T M N W V R R V P G G G L E W V A S I S T S S T Y R D Y A D A V K G R F T V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
G G G S
T T S
G G G S
T T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S R D D L E D F V Y L Q M H K M R V E D T A I Y Y C A R K G S D R L S D N D P F D A W G P G T V V T V S P A S T K G P S V F P L A P S S K S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
S
G G G
S S
S S
S
S
B
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T S G G T A A L G C L V K D Y F P E P V T V S W N S G A L T S G V H T F P A V L Q S S G L Y S L S S V V T V P S S S L G T Q T Y I C N V N H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S B S S
G G G T B
T T
T T S
G G G T T T

. . . . . . . . . 220 . . . .

Sequence K P S N T K V D K K V E P K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	V	Q	L	V	E	S	G	G	G	L	V	K	A	G	G	S	L	I	L	S	C	G	V	S	N	F	R	I	S	A	H	T	M	N	W	V	R	R	V	P	G	G	G	L	E	W	V	A	S	I	S	T	S	S	T	Y	R	D	Y	A	D	A	V	K	G	R	F	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T											S	S		G	G	G	S									T	T	S										G	G	G	S						T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	R	D	D	L	E	D	F	V	Y	L	Q	M	H	K	M	R	V	E	D	T	A	I	Y	Y	C	A	R	K	G	S	D	R	L	S	D	N	D	P	F	D	A	W	G	P	G	T	V	V	T	V	S	P	A	S	T	K	G	P	S	V	F	P	L	A	P	S	S	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T								S			G	G	G												S	S			S	S																S		S		B											S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	S	G	G	T	A	A	L	G	C	L	V	K	D	Y	F	P	E	P	V	T	V	S	W	N	S	G	A	L	T	S	G	V	H	T	F	P	A	V	L	Q	S	S	G	L	Y	S	L	S	S	V	V	T	V	P	S	S	S	L	G	T	Q	T	Y	I	C	N	V	N	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S												B	S	S							G	G	G	T	B		T	T										T	T	S												G	G	G	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Sequence	K	P	S	N	T	K	V	D	K	K	V	E	P	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	T