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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2oniA_

Fold library idPDB HeaderMoleculeTitle
c2oniA_PDB header: ligaseChain: A: PDB Molecule: e3 ubiquitin-protein ligase nedd4-like protein;PDBTitle: catalytic domain of the human nedd4-like e3 ligase


Added to library: Tue Mar 16 12:56:14 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LYFQGSREFKQKYDYFRKKLKKPADIPNRFEXKLHRNNIFEESYRRIXSVKRPDVLKARLWIEFEEKGLD
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Known secondary structure (DSSP)

STT



SSS
S
GGG
S
GGGGGS


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YGGVAREWFFLLSKEXFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDG
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Known secondary structure (DSSP) T
GGGSSSSTT



TT
TTT


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FFIRPFYKXXLGKQITLNDXESVDSEYYNSLKWILENDPTELDLXFCIDEENFGQTYQVDLKPNGSEIXV
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Known secondary structure (DSSP)
B
TT



TTT
S

GGG

BSTTSSTTGGG
B
 .........220.........230.........240.........250.........260.........270.........280
Sequence TNENKREYIDLVIQWRFVNRVQKQXNAFLEGFTELLPIDLIKIFDENELELLXCGLGDVDVNDWRQHSIY
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Known secondary structure (DSSP)
TTTTTTSS
TTS






T
 .........290.........300.........310.........320.........330.........340.........350
Sequence KNGYCPNHPVIQWFWKAVLLXDAEKRIRLLQFVTGTSRVPXNGFAELYGSNGPQLFTIEQWGSPEKLPRA
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Known secondary structure (DSSP) TT

TT
S
S
S


TT
GGG
TT



S
TTS

 .........360.........370.......
Sequence HTCFNRLDLPPYETFEDLREKLLXAVE
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Known secondary structure (DSSP) GGGT


SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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