PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2oi8A_

Fold library id	PDB Header	Molecule	Title
c2oi8A_	PDB header: transcription	Chain: A: PDB Molecule: putative regulatory protein sco4313;	PDBTitle: crystal structure of putative regulatory protein sco4313

Links to external resources
Added to library: Tue Mar 16 13:53:19 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T P R E R Y R T Q V R A E I K D H A W E Q I A T A G A S A L S L N A I A K R X G X S G P A L Y R Y F D G R D E L I T E L I R D A Y R S Q A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S
T T
T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S L R A A A A S G A D L A G L A H A L R A W A L D D P Q R Y F L I F G T P V P G Y R A P D D I T E I A A E T X A V I V D A C A A G T D G A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
T T
G G G T T T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . .

Sequence D A H L D T H R Q W A D R P A P S S A L H R A L S F W S R L H G V L S L E L A G Q F T G X G F D S A L L F E A E L K D L L G P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T T T T S
S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	P	R	E	R	Y	R	T	Q	V	R	A	E	I	K	D	H	A	W	E	Q	I	A	T	A	G	A	S	A	L	S	L	N	A	I	A	K	R	X	G	X	S	G	P	A	L	Y	R	Y	F	D	G	R	D	E	L	I	T	E	L	I	R	D	A	Y	R	S	Q	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S																							T	T	S										T	T								T	T		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	L	R	A	A	A	A	S	G	A	D	L	A	G	L	A	H	A	L	R	A	W	A	L	D	D	P	Q	R	Y	F	L	I	F	G	T	P	V	P	G	Y	R	A	P	D	D	I	T	E	I	A	A	E	T	X	A	V	I	V	D	A	C	A	A	G	T	D	G	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T																										S	S			T	T					G	G	G	T	T	T	T																	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Sequence	D	A	H	L	D	T	H	R	Q	W	A	D	R	P	A	P	S	S	A	L	H	R	A	L	S	F	W	S	R	L	H	G	V	L	S	L	E	L	A	G	Q	F	T	G	X	G	F	D	S	A	L	L	F	E	A	E	L	K	D	L	L	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S																																T	T	T	T	T	T	S		S														S