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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2odrB_

Fold library idPDB HeaderMoleculeTitle
c2odrB_PDB header: ligaseChain: B: PDB Molecule: phosphoseryl-trna synthetase;PDBTitle: methanococcus maripaludis phosphoseryl-trna synthetase


Added to library: Wed Jan 9 14:36:05 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence INESYPRIKPVFGKTHPVNDTIENLRQAYLRMGFEEYINPVIVDERDIYKQFGPEAMAVLDRCFYLAGLP
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Known secondary structure (DSSP)
TTSGGG








TT




SGGGT


B

 .........80.........90.........100.........110.........120.........130.........140
Sequence RFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGE
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B

S


TTTTS
S



S


SS

S
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GVDINDGKAIAEGLLSQFGFTNFKFIPDEKKSKYYTPETQTEVYAYHPKLKEWLEVATFGVYSPVALSKY
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Known secondary structure (DSSP) T

TTT



TT

TTB
TT

TTTTB
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GIDVPVMNLGLGVERLAMISGNFADVREMVYPQFYEHKLNDRNVASMVKLDKVPVMDEIYDLTKELIESC
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Known secondary structure (DSSP) T

S
TT
S

GGGS




TTS


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VKNSILNEIYVYDGNVIGIPEFKDFLEKGKSEGVATGIRYIDALCFKITSKLEEADINLKIDDIALKQIM
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Known secondary structure (DSSP)




TT

B


S


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence SKNKVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TT










TT




S
S















 .........430.........440........
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)



TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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