Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2odrA_

Fold library idPDB HeaderMoleculeTitle
c2odrA_PDB header: ligaseChain: A: PDB Molecule: phosphoseryl-trna synthetase;PDBTitle: methanococcus maripaludis phosphoseryl-trna synthetase


Added to library: Wed Jan 9 19:31:01 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence REEIIEMANKDFEKAWIETKDLIKAKKINESYPRIKPVFGKTHPVNDTIENLRQAYLRMGFEEYINPVIV
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)

GGGS



TTTSGGGS







TT




S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DERDIYKQFGPEAMAVLDRCFYLAGLPRFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSID
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) GGGT


B








B

S


TTTTS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence RCFRREQKEDKSHLMTYHSASCAIAGEGVDINDGKAIAEGLLSQFGFTNFKFIPDEKKSKYYTPETQTEV
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)


S


SS

S
TT

TTT



TT

TTB
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence YAYHPKLKEWLEVATFGVYSPVALSKYGIDVPVMNLGLGVERLAMISGNFADVREMVYPQFYEHKLNDRN
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) TTTTB
TT

S
TT
S

GGGS




 .........290.........300.........310.........320.........330.........340.........350
Sequence VASMVKLDKVPVMDEIYDLTKELIESCVKNSILNEIYVYDGNVIGIPEFKDFLEKGKSEGVATGIRYIDA
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) TTS


SS




TT

B


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence LCFKITSKLEEAINLKIDDIALKQIMSKNKVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)



TT










SS




S
S


 .........430.........440.........450.........460.........470.........480.........490
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Predicted secondary structure





































































SS confidence





































































Known secondary structure (DSSP)












TT



TTTTSS


TT
 .
Sequence X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D