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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2oblA_

Fold library idPDB HeaderMoleculeTitle
c2oblA_PDB header: hydrolaseChain: A: PDB Molecule: escn;PDBTitle: structural and biochemical analysis of a prototypical atpase2 from the type iii secretion system of pathogenic bacteria


Added to library: Tue Mar 16 12:39:18 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SHKIRVGDALLGRLIDGIGRPMESNIVAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIG
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Known secondary structure (DSSP)


GGGTT

TTS
B
S

SS




S



S
STT




S

S
S
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALER
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Known secondary structure (DSSP)

TTSSS

SS

TTS
TT
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MKAAFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAP
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Known secondary structure (DSSP) TTT
TTT



BTTB
TT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence KGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVTSEHLRAA
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Known secondary structure (DSSP) SS

SS




SB
TTT
SS
B
GGG
TTS
 .........290.........300.........310.........320.........330.........340......
Sequence AECKKLIATYKNPELLIRIGEYTMGQDPEADKAIKNRKLIQNFIQQSTKDISSYEKTIESLFKVVA
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Known secondary structure (DSSP)


TTTT




S
T


TT



T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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