Fold library entry viewer: c2oajA_

Added to library: Tue Mar 16 13:34:43 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	N	K	I	F	S	L	A	E	T	N	K	Y	G	M	S	S	K	P	I	A	A	A	F	D	F	T	Q	N	L	L	A	I	A	T	V	T	G	E	V	H	I	Y	G	Q	Q	Q	V	E	V	V	I	K	L	E	D	R	S	A	I	K	E	M	R	F	V	K	G	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T												S	S									T	T	T	T							T	T	S							S	T	T								S	S											T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	V	V	I	N	A	K	D	T	V	Y	V	L	S	L	Y	S	Q	K	V	L	T	T	V	F	V	P	G	K	I	T	S	I	D	T	D	A	S	L	D	W	M	L	I	G	L	Q	N	G	S	M	I	V	Y	D	I	D	R	D	Q	L	S	S	F	K	L	D	N	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T								T	T	T		S								S	S									T	T		S							T	T	S							T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	S	S	F	F	P	A	A	R	L	S	P	I	V	S	I	Q	W	N	P	R	D	I	G	T	V	L	I	S	Y	E	Y	V	T	L	T	Y	S	L	V	E	N	E	I	K	Q	S	F	I	Y	E	L	P	P	F	A	P	G	G	D	F	S	E	K	T	N	E	K	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T		S	S	S												T	T										S	S							T	T	T	T										B		T	T				S	T	T				T	T	S		B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	K	V	I	Q	S	L	Y	H	P	N	S	L	H	I	I	T	I	H	E	D	N	S	L	V	F	W	D	A	N	S	G	H	M	I	M	A	R	T	V	F	E	T	E	I	N	V	P	Q	P	D	Y	I	R	D	S	S	T	N	A	A	K	I	S	K	V	Y	W	M	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S	S							T	T								T	T	T									S	S		S		T	T	S			T	T						S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	N	N	P	E	Y	T	S	L	L	I	S	H	K	S	I	S	R	G	D	N	Q	S	L	T	M	I	D	L	G	Y	T	P	R	Y	S	I	T	S	Y	E	G	M	K	N	Y	Y	A	N	P	K	Q	M	K	I	F	P	L	P	T	N	V	P	I	V	N	I	L	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	T	T											S	T	T	S	S															G	G	G												S		S								S	S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	R	Q	S	P	Y	F	A	G	C	H	N	P	G	L	I	L	L	I	L	G	N	G	E	I	E	T	M	L	Y	P	S	G	I	F	T	D	K	A	S	L	F	P	Q	N	L	S	W	L	R	P	L	A	T	T	S	M	A	A	S	V	P	N	K	L	W	L	G	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		S					T	B	S		S							T	T	S							T	T	T							G	G	G	S		G	G	G	T	T	B	T	T	B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	A	A	Q	N	K	D	Y	L	L	K	G	G	V	R	T	K	R	Q	K	L	P	A	E	Y	G	T	A	F	I	T	G	H	S	N	G	S	V	R	I	Y	D	A	S	H	G	D	I	Q	D	N	A	S	F	E	V	N	L	S	R	T	L	N	K	A	K	E	L	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	B					S				S	B										S										T	T	S							S	S			T	T	T	T	T	B										T	T		S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	K	I	S	F	A	A	E	T	L	E	L	A	V	S	I	E	T	G	D	V	V	L	F	K	Y	E	V	N	Q	F	F	R	R	F	S	L	N	N	T	N	G	V	L	V	D	V	R	D	R	A	P	T	G	V	R	Q	G	F	M	P	S	T	A	V	H	A	N	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T							T	T	S															S			G	G	G	S	S		S					G	G	G			T	T		S													S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	T	S	A	I	N	N	S	N	I	G	F	V	G	I	A	Y	A	A	G	S	L	M	L	I	D	R	R	G	P	A	I	I	Y	M	E	N	I	R	E	I	S	G	A	Q	S	A	C	V	T	C	I	E	F	V	I	M	E	Y	G	D	D	G	Y	S	S	I	L	M	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S								B	T	S							T	T	S							T	T	T	T								G	G	G	T		S	S																T	T	S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	C	G	T	D	M	G	E	V	I	T	Y	K	I	L	P	A	S	G	G	K	F	D	V	Q	L	M	D	I	T	N	V	T	S	K	G	P	I	H	K	I	D	A	F	S	K	E	T	K	S	S	C	L	A	T	I	P	K	M	Q	N	L	S	K	G	L	C	I	P	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S											G	G	G														S	S											T	T	T			B		B		B						G	G	G	G	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	L	I	T	G	F	D	D	I	R	L	I	T	L	G	K	S	K	S	T	H	K	G	F	K	Y	P	L	A	A	T	G	L	S	Y	I	S	T	V	E	K	N	N	D	R	K	N	L	T	V	I	I	T	L	E	I	N	G	H	L	R	V	F	T	I	P	D	F	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S							T	T										S	S															S	S	S													T	T	S							T	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	Q	M	S	E	H	I	P	F	P	I	A	A	K	Y	I	T	E	S	S	V	L	R	N	G	D	I	A	I	R	V	S	E	F	Q	A	S	L	F	S	T	V	K	E	Q	D	T	L	A	P	V	S	D	T	L	Y	I	N	G	I	R	I	P	Y	R	P	Q	V	N	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S								T	T					T	T	S							S	S	S									S											B				T	T											T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.
Sequence	Q	W	A	R	G	T	V	Y	C	T	P	A	Q	L	N	E	L	L	G	G	V	N	R	P	A	S	K	Y	K	E	S	I	I	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S		S	S																T	T					S

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PDB structure

FASTA sequence

Hidden Markov model

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