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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2o6qA_ | PDB header: immune system | Chain: A: PDB Molecule: variable lymphocyte receptor a; | PDBTitle: structural diversity of the hagfish variable lymphocyte2 receptors a29 |
Added to library: Tue Mar 16 11:55:36 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | N | E | A | L | C | K | K | D | G | G | V | C | S | C | N | N | N | K | N | S | V | D | C | S | S | K | K | L | T | A | I | P | S | N | I | P | A | D | T | K | K | L | D | L | Q | S | N | K | L | S | S | L | P | S | K | A | F | H | R | L | T | K | L | R | L | L | Y | L | N | D |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | G | G | G | T | S | B | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | T | T | S | S | S | S | T | T | S | ![]() | ![]() | ![]() | S | S | S | T | T | S | S | S | S | T | T | ![]() | ![]() | ![]() | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | N | K | L | Q | T | L | P | A | G | I | F | K | E | L | K | N | L | E | T | L | W | V | T | D | N | K | L | Q | A | L | P | I | G | V | F | D | Q | L | V | N | L | A | E | L | R | L | D | R | N | Q | L | K | S | L | P | P | R | V | F | D | S | L | T | K | L | T | Y | L | S | L |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | T | T | T | T | S | S | T | T | ![]() | ![]() | ![]() | S | S | T | T | T | T | T | T | S | S | ![]() | ![]() | ![]() | S | S | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | G | Y | N | E | L | Q | S | L | P | K | G | V | F | D | K | L | T | S | L | K | E | L | R | L | Y | N | N | Q | L | K | R | V | P | E | G | A | F | D | K | L | T | E | L | K | T | L | K | L | D | N | N | Q | L | K | R | V | P | E | G | A | F | D | S | L | E | K | L | K | M | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | S | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | S | T | T | T | T | T | T | T | T | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 |
Sequence | Q | L | Q | E | N | P | W | D | C | T | C | N | G | I | I | Y | M | A | K | W | L | K | K | K | A | D | E | G | L | G | G | V | D | T | A | G | C | E | K | G | G | K | A | V | L | E | I | T | E | K | D | A | A | S | D | C | V | S | P | N | ||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | S | S | B | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | T | T | B | B | S | S | S | S | B | G | G | G | T | T | T | T | S | S |
Download: | PDB structure | FASTA sequence |
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