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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2o6qA_

Fold library idPDB HeaderMoleculeTitle
c2o6qA_PDB header: immune systemChain: A: PDB Molecule: variable lymphocyte receptor a;PDBTitle: structural diversity of the hagfish variable lymphocyte2 receptors a29


Added to library: Tue Mar 16 11:55:36 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NEALCKKDGGVCSCNNNKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLND
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Known secondary structure (DSSP)



BGGGT
SBTTTT
TTS

SS

S


TT
S

SS

S


TTSSSS
TT



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence NKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL
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Known secondary structure (DSSP) S

S


TTTTSS
TT



SS





TTTTTT
SS



SS





TTTTTT
TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKML
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Known secondary structure (DSSP)
SS





TTTTTT
TT



SS

S


TTTTTT
TT



SS

S


TTTTTT
TT

 .........220.........230.........240.........250.........260.........270
Sequence QLQENPWDCTCNGIIYMAKWLKKKADEGLGGVDTAGCEKGGKAVLEITEKDAASDCVSPN
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Known secondary structure (DSSP)

SS
B

SSSSSTT
SSTT

BBSSS
SBGGG

TTTT
S


S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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