PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2o0rA_

Fold library id	PDB Header	Molecule	Title
c2o0rA_	PDB header: transferase	Chain: A: PDB Molecule: rv0858c (n-succinyldiaminopimelate	PDBTitle: the three-dimensional structure of n-2 succinyldiaminopimelate aminotransferase from3 mycobacterium tuberculosis

Links to external resources
Added to library: Tue Mar 16 14:07:50 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A T V S R L R P Y A T T V F A E M S A L A T R I G A V N L G Q G F P D E D G P P K M L Q A A Q D A I A G G V N Q Y P P G P G S A P L R R A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G G G S S
T T T
S S
S S
S S
T T
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A A Q R R R H F G V D Y D P E T E V L V T V G A T E A I A A A V L G L V E P G S E V L L I E P F Y D S Y S P V V A M A G A H R V T V P L V P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
T T
S
T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D G R G F A L D A D A L R R A V T P R T R A L I I N S P H N P T G A V L S A T E L A A I A E I A V A A N L V V I T D E V Y E H L V F D H A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S S
T T T
T T
T T T T
B
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence H L P L A G F D G M A E R T I T I S S A A M F N C T G W K I G W A C G P A E L I A G V R A A K Q Y L S Y V G G A P F Q P A V A L A L D T E D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S T T T G G G
S
T T T
T S
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence A W V A A L R N S L R A R R D R L A A G L T E I G F A V H D S Y G T Y F L C A D P R P L G Y D D S T E F C A A L P E K V G V A A I P M S A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
B S S
G G G T
S
G G G G

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . .

Sequence C D P A D V W N H L V R F T F C K R D D T L D E A I R R L S V L A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G
S
G G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	T	V	S	R	L	R	P	Y	A	T	T	V	F	A	E	M	S	A	L	A	T	R	I	G	A	V	N	L	G	Q	G	F	P	D	E	D	G	P	P	K	M	L	Q	A	A	Q	D	A	I	A	G	G	V	N	Q	Y	P	P	G	P	G	S	A	P	L	R	R	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	G	G	G	S	S												T	T	T				S	S		S	S		S	S																T	T			S				T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	A	Q	R	R	R	H	F	G	V	D	Y	D	P	E	T	E	V	L	V	T	V	G	A	T	E	A	I	A	A	A	V	L	G	L	V	E	P	G	S	E	V	L	L	I	E	P	F	Y	D	S	Y	S	P	V	V	A	M	A	G	A	H	R	V	T	V	P	L	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	T	S																					T	T								S			T	T								T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	G	R	G	F	A	L	D	A	D	A	L	R	R	A	V	T	P	R	T	R	A	L	I	I	N	S	P	H	N	P	T	G	A	V	L	S	A	T	E	L	A	A	I	A	E	I	A	V	A	A	N	L	V	V	I	T	D	E	V	Y	E	H	L	V	F	D	H	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T															T	T								S	S		T	T	T																			T	T								T	T	T	T		B		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	L	P	L	A	G	F	D	G	M	A	E	R	T	I	T	I	S	S	A	A	M	F	N	C	T	G	W	K	I	G	W	A	C	G	P	A	E	L	I	A	G	V	R	A	A	K	Q	Y	L	S	Y	V	G	G	A	P	F	Q	P	A	V	A	L	A	L	D	T	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	S	T	T	T	G	G	G											S		T	T	T																							T	S				T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	W	V	A	A	L	R	N	S	L	R	A	R	R	D	R	L	A	A	G	L	T	E	I	G	F	A	V	H	D	S	Y	G	T	Y	F	L	C	A	D	P	R	P	L	G	Y	D	D	S	T	E	F	C	A	A	L	P	E	K	V	G	V	A	A	I	P	M	S	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T								B	S	S							G	G	G	T																S						G	G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Sequence	C	D	P	A	D	V	W	N	H	L	V	R	F	T	F	C	K	R	D	D	T	L	D	E	A	I	R	R	L	S	V	L	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						G	G	G								S													G	G	G	G