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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2nyyA_

Fold library idPDB HeaderMoleculeTitle
c2nyyA_PDB header: toxin/immune systemChain: A: PDB Molecule: botulinum neurotoxin type a;PDBTitle: crystal structure of botulinum neurotoxin type a complexed2 with monoclonal antibody cr1


Added to library: Tue Mar 16 12:34:46 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PFVNKQFNYKDPVNGVDIAYIKIPNVGQMQPVKAFKIHNKIWVIPERDTFTNPEEGDLNPPPEAKQVPVS
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Known secondary structure (DSSP)

S
S


TTS


SSS

BSS



TT
S


SS
TT



S

SS

S
S

 .........80.........90.........100.........110.........120.........130.........140
Sequence YYDSTYLSTDNEKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGGSTIDTELKVIDTNCINVIQPD
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Known secondary structure (DSSP)


TTTT
STSTT




B

SSTTB

GGG
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GSYRSEELNLVIIGPSADIIQFECKSFGHEVLNLTRNGYGSTQYIRFSPDFTFGFEESLEVDTNPLLGAG
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Known secondary structure (DSSP) S

S


SSTT


B

SS

TTTSS





SS

SSGGGT
SS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KFATDPAVTLAHELIHAGHRLYGIAINPNRVFKVNTNAYYEMSGLEVSFEELRTFGGHDAKFIDSLQENE
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Known secondary structure (DSSP)


TT



TT
B

B


STTB
S



B
TTGGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence FRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEKYLLSEDTSGKFSVDKLKFDKLYKMLTEIYTE
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Known secondary structure (DSSP)


SBSS
T

TTS


TTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence DNFVKFFKVLNRKTYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAANFNGQNTEINNMNFTKLKNFTG
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Known secondary structure (DSSP) T



SSTTS





SSTTT
BTTTBTS
TTSTTSSSSGGGBTTTTGGG



SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LFEFYKLLCVRLCIKVNNWDLFFSPSEDNFTNDLNKGEEITSDTNIEANISLDLIQQYYLTFNFDNEPEN
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Known secondary structure (DSSP) TTSS

GGGSB

B
GGG



TT


SS







TT








 .........500.........510.........520.........530.........540.........550.........560
Sequence ISIENLSSDIIGQLELMPNIERFPNGKKYELDKYTMFHYLRAQEFEHGKSRIALTNSVNEALLNPSRVYT
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Known secondary structure (DSSP)

B



SS
B

B












SS

TT




SSS



BSSS

SSSS


B
 .........570.........580.........590.........600.........610.........620.........630
Sequence FFSSDYVKKVNKATEAAMFLGWVEQLVYDFTDETSEVSIADITIIIPYIGPALNIGNMLYKDDFVGALIF
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Known secondary structure (DSSP) SS
TTTS


STTS




SS



TTTTTT

S
S
 .........640.........650.........660.........670.........680.........690.........700
Sequence SGAVILLEFIPEIAIPVLGTFALVSYIANKVLTVQTIDNALSKRNEKWDEVYKYIVTNWLAKVNTQIDLI
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Known secondary structure (DSSP)
GGGT
SS













TT
T
 .........710.........720.........730.........740.........750.........760.........770
Sequence RKKMKEALENQAEATKAIINYQYNQYTEEEKNNINFNIDDLSSKLNESINKAMININKFLNQCSVSYLMN
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Known secondary structure (DSSP) SS
SSTTTTS


 .........780.........790.........800.........810.........820.........830.........840
Sequence SMIPYGVKRLEDFDASLKDALLKYIYDNRGTLIGQVDRLKDKVNNTLSTDIPFQLSKYVDNQRLLSTFTE
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Known secondary structure (DSSP) TTTTTTTTTTS




GGGT


 .........850.........860.........870.........880.........890.........900.........910
Sequence YIKNIINTSILNLRYESNHLIDLSRYASKINIGSKVNFDPIDKNQIQLFNLESSKIEVILKNAIVYNSMY
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Known secondary structure (DSSP) SGGGG
STTTTS

TT
TT
TT
SSTTS

GGG

TTTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence ENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINIS
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Known secondary structure (DSSP) S




SGGGGG

TTTT
SSS


SBSSS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence DYINRWIFVTITNNRLNNSKIYINGRLIDQKPISNLGNIHASNNIMFKLDGCRDTHRYIWIKYFNLFDKE
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Known secondary structure (DSSP) SSTTS
TTSTT
TT






SS


TT
SS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence LNEKEIKDLYDNQSNSGILKDFWGDYLQYDKPYYMLNLYDPNKYVDVNNVGIRGYMYLKGPRGSVMTTNI
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Known secondary structure (DSSP)

T
TTB
B
TTSSB
BSS

BSSSTT
SSSSTT





TTT
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence YLNSSLYRGTKFIIKKYASGNKDNIVRNNDRVYINVVVKNKEYRLATNASQAGVEKILSALEIPDVGNLS
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Known secondary structure (DSSP)

S
S

SS


SS
B
BTT
TTB
TTSSSS
GGG
TT
B
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence QVVVMKSKNDQGITNKCKMNLQDNNGNDIGFIGFHQFNNIAKLVASNWYNRQIERSSRTLGCSWEFIPVD
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Known secondary structure (DSSP)

STTT
SB

TTS


SSS

BTTT




TTB


 .......
Sequence DGWGERP
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SS confidence






Known secondary structure (DSSP) TTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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