PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2nyuA_

Fold library id	PDB Header	Molecule	Title
c2nyuA_	PDB header: transferase	Chain: A: PDB Molecule: putative ribosomal rna methyltransferase 2;	PDBTitle: crystal structure of human ftsj homolog 2 (e.coli) protein2 in complex with s-adenosylmethionine

Links to external resources
Added to library: Tue Mar 16 12:40:42 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S Y R S R S A F K L L E V N E R H Q I L R P G L R V L D C G A A P G A W S Q V A V Q K V N A A G T D P S S P V G F V L G V D L L H I F P L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T
T T
T
S
T T T T
T T S
S S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G A T F L C P A D V T D P R T S Q R I L E V L P G R R A D V I L S D M A P N A T G F R D L D H D R L I S L C L T L L S V T P D I L Q P G G T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T T S S G G G
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 .

Sequence F L C K T W A G S Q S R R L Q R R L T E E F Q N V R I I K P E V Y F L A T Q Y H G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S G G G

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	Y	R	S	R	S	A	F	K	L	L	E	V	N	E	R	H	Q	I	L	R	P	G	L	R	V	L	D	C	G	A	A	P	G	A	W	S	Q	V	A	V	Q	K	V	N	A	A	G	T	D	P	S	S	P	V	G	F	V	L	G	V	D	L	L	H	I	F	P	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	T																	T	T							T			S											T	T	T	T				T	T	S										S	S						T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	A	T	F	L	C	P	A	D	V	T	D	P	R	T	S	Q	R	I	L	E	V	L	P	G	R	R	A	D	V	I	L	S	D	M	A	P	N	A	T	G	F	R	D	L	D	H	D	R	L	I	S	L	C	L	T	L	L	S	V	T	P	D	I	L	Q	P	G	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T						S			T	T	S											S	G	G	G															S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Sequence	F	L	C	K	T	W	A	G	S	Q	S	R	R	L	Q	R	R	L	T	E	E	F	Q	N	V	R	I	I	K	P	E	V	Y	F	L	A	T	Q	Y	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	G	G	G