PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2nykA_

Fold library id	PDB Header	Molecule	Title
c2nykA_	PDB header: viral protein	Chain: A: PDB Molecule: m157;	PDBTitle: crystal structure of m157 from mouse cytomegalovirus

Links to external resources
Added to library: Tue Mar 16 11:56:08 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D T Y I V N M D D F Q F T F T M E F E V T V T R G G V H K R T I S V D N G R P V V V W D V R D P K I C K I C P D V S S T D I E Y V F L D I Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T
S
T T S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K M R L N N L L T Q S L W D T Q R I C V R Y A C L F L G F D V I C D V Y H T T D T V R V A Y T G Q T G K E I G T Y M I K S N V R E I K N R W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R S T V Q K L K Q L A Y M N A T E V E F W Y N L T T C V V T S R S N V P F T V E L S L S A I V T D E S T V D C Q I L T V K A P G S H A Q R C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S G G G
S S
S S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . .

Sequence Y V T S S L G W K G V V T P P S Q Y R T K R V P V N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
B S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	T	Y	I	V	N	M	D	D	F	Q	F	T	F	T	M	E	F	E	V	T	V	T	R	G	G	V	H	K	R	T	I	S	V	D	N	G	R	P	V	V	V	W	D	V	R	D	P	K	I	C	K	I	C	P	D	V	S	S	T	D	I	E	Y	V	F	L	D	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T	S									T	T		S														T	T	S					T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	M	R	L	N	N	L	L	T	Q	S	L	W	D	T	Q	R	I	C	V	R	Y	A	C	L	F	L	G	F	D	V	I	C	D	V	Y	H	T	T	D	T	V	R	V	A	Y	T	G	Q	T	G	K	E	I	G	T	Y	M	I	K	S	N	V	R	E	I	K	N	R	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T		S												T	T											S	S																				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	S	T	V	Q	K	L	K	Q	L	A	Y	M	N	A	T	E	V	E	F	W	Y	N	L	T	T	C	V	V	T	S	R	S	N	V	P	F	T	V	E	L	S	L	S	A	I	V	T	D	E	S	T	V	D	C	Q	I	L	T	V	K	A	P	G	S	H	A	Q	R	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S	G	G	G																	S	S																				S	S									T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Sequence	Y	V	T	S	S	L	G	W	K	G	V	V	T	P	P	S	Q	Y	R	T	K	R	V	P	V	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T							S		B	S	S