Fold library entry viewer: c2nvuB_

Added to library: Tue Mar 16 14:07:23 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	I	E	E	G	K	L	V	I	W	I	N	G	D	K	G	Y	N	G	L	A	E	V	G	K	K	F	E	K	D	T	G	I	K	V	T	V	E	H	P	D	K	L	E	E	K	F	P	Q	V	A	A	T	G	D	G	P	D	I	I	F	W	A	H	D	R	F	G	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S							T	T	S		S															S									T	T											S	S		S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	Q	S	G	L	L	A	E	I	T	P	D	K	A	F	Q	D	K	L	Y	P	F	T	W	D	A	V	R	Y	N	G	K	L	I	A	Y	P	I	A	V	E	A	L	S	L	I	Y	N	K	D	L	L	P	N	P	P	K	T	W	E	E	I	P	A	L	D	K	E	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		B											T	S	B		T	T					T			T	T																		T	T	T		S	S			S	B	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	K	G	K	S	A	L	M	F	N	L	Q	E	P	Y	F	T	W	P	L	I	A	A	D	G	G	Y	A	F	K	Y	E	N	G	K	Y	D	I	K	D	V	G	V	D	N	A	G	A	K	A	G	L	T	F	L	V	D	L	I	K	N	K	H	M	N	A	D	T	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T									S	S											T	T								S	S	S								T	S	S																S	S	S			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	I	A	E	A	A	F	N	K	G	E	T	A	M	T	I	N	G	P	W	A	W	S	N	I	D	T	S	K	V	N	Y	G	V	T	V	L	P	T	F	K	G	Q	P	S	K	P	F	V	G	V	L	S	A	G	I	N	A	A	S	P	N	K	E	L	A	K	E	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T									T	T	T	T	T	T	T	T	T	T	T						B				B		S	S	S														B	S	S		S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	N	Y	L	L	T	D	E	G	L	E	A	V	N	K	D	K	V	A	L	K	S	Y	E	E	E	A	T	M	E	N	A	Q	K	G	E	I	M	P	N	I	P	Q	M	S	A	F	W	Y	A	V	R	T	A	V	I	N	A	A	S	G	R	Q	T	V	D	A	A	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	S	S									T	T				B					T										S		B				S	T	T																	T	T	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	A	Q	T	N	A	A	A	D	W	E	G	R	W	N	H	V	K	K	F	L	E	R	S	G	P	F	T	H	P	D	F	E	P	S	T	E	S	L	Q	F	L	L	D	T	C	K	V	L	V	I	G	A	G	G	L	G	C	E	L	L	K	N	L	A	L	S	G	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S		T	T	T	T									S			T	T	S		T	T					S									T									S	S											T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Q	I	H	V	I	D	M	D	T	I	D	V	S	N	L	N	R	Q	F	L	F	R	P	K	D	I	G	R	P	K	A	E	V	A	A	E	F	L	N	D	R	V	P	N	C	N	V	V	P	H	F	N	K	I	Q	D	F	N	D	T	F	Y	R	Q	F	H	I	I	V	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B			G	G	G	G	G	T		T	T			G	G	G	T	T	S	B													S	T	T								S		G	G	G	S							T		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	L	D	S	I	I	A	R	R	W	I	N	G	M	L	I	S	L	L	N	Y	E	D	G	V	L	D	P	S	S	I	V	P	L	I	D	G	G	T	E	G	F	K	G	N	A	R	V	I	L	P	G	M	T	A	C	I	E	C	T	L	E	L	Y	P	P	Q	V	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S															T					T	T				G	G	G											T	T									T	T	T	S			T	T	T	S	G	G	G	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	M	C	T	I	A	S	M	P	R	L	P	E	H	C	I	E	Y	V	R	M	L	Q	W	P	K	E	Q	P	F	G	E	G	V	P	L	D	G	D	D	P	E	H	I	Q	W	I	F	Q	K	S	L	E	R	A	S	Q	Y	N	I	R	G	V	T	Y	R	L	T	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S											T							T	T	S	T	T					T	T																			T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	V	V	K	R	I	I	P	A	V	A	S	T	N	A	V	I	A	A	V	C	A	T	E	V	F	K	I	A	T	S	A	Y	I	P	L	N	N	Y	L	V	F	N	D	V	D	G	L	Y	T	Y	T	F	E	A	E	R	K	E	N	C	P	A	C	S	Q	L	P	Q	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T																											S	S					S							S	S	S												T	T		T	T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	Q	F	S	P	S	A	K	L	Q	E	V	L	D	Y	L	T	N	S	A	S	L	Q	M	K	S	P	A	I	T	A	T	L	E	G	K	N	R	T	L	Y	L	Q	S	V	T	S	I	E	E	R	T	R	P	N	L	S	K	T	L	K	E	L	G	L	V	D	G	Q	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S	B												T	T	T			S	S								T	T									S	S								G	G	G	G	G	S	B	T	T	T	T	T			T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.
Sequence	A	V	A	D	V	T	T	P	Q	T	V	L	F	K	L	H	F	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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