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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2nu8D_

Fold library idPDB HeaderMoleculeTitle
c2nu8D_PDB header: ligaseChain: D: PDB Molecule: succinyl-coa ligase [adp-forming] subunit alpha;PDBTitle: c123at mutant of e. coli succinyl-coa synthetase


Added to library: Tue Mar 16 13:36:57 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence SILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVI
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Known secondary structure (DSSP)

S

TT
TTTST

TT
TT
TTSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence YVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNTPGVITPGECKIGIQPGH
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Known secondary structure (DSSP)


GGGTT







T

SS

TTTSS
GG
 .........150.........160.........170.........180.........190.........200.........210
Sequence IHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIG
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Known secondary structure (DSSP) G

S
TT



SSSS
SS
T
TT

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GSAEEEAAAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIG
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Known secondary structure (DSSP) SS

S

TT

TT


SSTT



TT


TT

SSGGG
 .......
Sequence EALKTVL
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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