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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2mpvA_

Fold library idPDB HeaderMoleculeTitle
c2mpvA_PDB header: protein bindingChain: A: PDB Molecule: major fimbrial subunit of aggregative adherence fimbria iiPDBTitle: structural insight into host recognition and biofilm formation by2 aggregative adherence fimbriae of enteroaggregative esherichia coli


Added to library: Sat Nov 1 08:17:35 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NFCDITITPATNRDVNVDRSANIDLSFTIRQPQRCADAGMRIKAWGEANHGQLLIKPQGGNKSAGFTLAS
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Known secondary structure (DSSP)





B
TTSS
SS
B


S


TTT


SSTTSS

BTTS
GGGSB

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PRFSYIPNNPANIMNGFVLTNPGVYQLGMQGSITPAIPLRPGLYEVVLNAELVTNDNKQNATAVAKTATS
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Known secondary structure (DSSP)


TT



S
TTSB


TT


TTS


S


SSS
SSSS
S

 .....
Sequence TITVV
Predicted secondary structure
SS confidence




Known secondary structure (DSSP)
B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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