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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2mpvA_ | PDB header: protein binding | Chain: A: PDB Molecule: major fimbrial subunit of aggregative adherence fimbria ii | PDBTitle: structural insight into host recognition and biofilm formation by2 aggregative adherence fimbriae of enteroaggregative esherichia coli |
Added to library: Sat Nov 1 08:17:35 2014 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | N | F | C | D | I | T | I | T | P | A | T | N | R | D | V | N | V | D | R | S | A | N | I | D | L | S | F | T | I | R | Q | P | Q | R | C | A | D | A | G | M | R | I | K | A | W | G | E | A | N | H | G | Q | L | L | I | K | P | Q | G | G | N | K | S | A | G | F | T | L | A | S |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | T | T | S | S | S | S | B | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | S | S | T | T | S | S | B | ![]() | ![]() | T | T | S | G | G | G | S | B | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | P | R | F | S | Y | I | P | N | N | P | A | N | I | M | N | G | F | V | L | T | N | P | G | V | Y | Q | L | G | M | Q | G | S | I | T | P | A | I | P | L | R | P | G | L | Y | E | V | V | L | N | A | E | L | V | T | N | D | N | K | Q | N | A | T | A | V | A | K | T | A | T | S |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | T | T | S | T | T | S | B | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | ||||||||||||||||||
Sequence | T | I | T | V | V | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | B |
Download: | PDB structure | FASTA sequence |
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