PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2mjlA_

Fold library id	PDB Header	Molecule	Title
c2mjlA_	PDB header: hydrolase	Chain: A: PDB Molecule: peptidyl-trna hydrolase;	PDBTitle: solution structure of peptidyl-trna hyrolase from vibrio cholerae

Links to external resources
Added to library: Sat Jan 24 08:17:06 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M V S Q P I K L L V G L A N P G P E Y A K T R H N A G A W V V E E L A R I H N V T L K N E P K F F G L T G R L L I N S Q E L R V L I P T T F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
S T S S T T T
T T T T T T S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence M N L S G K A I A A L A N F Y Q I K P E E I M V A H D E L D L P P G V A K F K Q G G G H G G H N G L K D T I S K L G N N K E F Y R L R L G I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
G G G S S S
T T B S
S
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . .

Sequence G H P G H K D K V A G Y V L G K A P A K E Q E C L D A A V D E S V R C L E I L M K D G L T K A Q N R L H T F K A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S T T S
T
T T
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	V	S	Q	P	I	K	L	L	V	G	L	A	N	P	G	P	E	Y	A	K	T	R	H	N	A	G	A	W	V	V	E	E	L	A	R	I	H	N	V	T	L	K	N	E	P	K	F	F	G	L	T	G	R	L	L	I	N	S	Q	E	L	R	V	L	I	P	T	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S			S						S			S					T	S	S	T	T														T							T	T	T	T									T	T									S		T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	N	L	S	G	K	A	I	A	A	L	A	N	F	Y	Q	I	K	P	E	E	I	M	V	A	H	D	E	L	D	L	P	P	G	V	A	K	F	K	Q	G	G	G	H	G	G	H	N	G	L	K	D	T	I	S	K	L	G	N	N	K	E	F	Y	R	L	R	L	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T														T			G	G	G								S	S	S		T	T	B						S					S										T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Sequence	G	H	P	G	H	K	D	K	V	A	G	Y	V	L	G	K	A	P	A	K	E	Q	E	C	L	D	A	A	V	D	E	S	V	R	C	L	E	I	L	M	K	D	G	L	T	K	A	Q	N	R	L	H	T	F	K	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		T	T	S	T					T	S																											T										T	T		B