PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2mc0A_

Fold library id	PDB Header	Molecule	Title
c2mc0A_	PDB header: transcription activator/antibiotic	Chain: A: PDB Molecule: hth-type transcriptional activator tipa;	PDBTitle: structural basis of a thiopeptide antibiotic multidrug resistance2 system from streptomyces lividans:nosiheptide in complex with tipas

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Added to library: Sat Dec 13 11:39:49 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G I N L T P E E K F E V F G D F D P D Q Y E E E V R E R W G N T D A Y R Q S K E K T A S Y T K E D W Q R I Q D E A D E L T R R F V A L M D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S
T S S
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G E P A D S E G A M D A A E D H R Q G I A R N H Y D C G Y E M H T C L G E M Y V S D E R F T R N I D A A K P G L A A Y M R D A I L A N A V R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S T T T
T T T T S T T S S S

. . .

Sequence H T P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	I	N	L	T	P	E	E	K	F	E	V	F	G	D	F	D	P	D	Q	Y	E	E	E	V	R	E	R	W	G	N	T	D	A	Y	R	Q	S	K	E	K	T	A	S	Y	T	K	E	D	W	Q	R	I	Q	D	E	A	D	E	L	T	R	R	F	V	A	L	M	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	S	S														T	S	S												T	T																									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	E	P	A	D	S	E	G	A	M	D	A	A	E	D	H	R	Q	G	I	A	R	N	H	Y	D	C	G	Y	E	M	H	T	C	L	G	E	M	Y	V	S	D	E	R	F	T	R	N	I	D	A	A	K	P	G	L	A	A	Y	M	R	D	A	I	L	A	N	A	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			T	T	S																T	T	T														T	T	T	T	S									T	T	S	S	S
	.	.	.
Sequence	H	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)