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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2m88A_

Fold library idPDB HeaderMoleculeTitle
c2m88A_PDB header: rna binding proteinChain: A: PDB Molecule: protein nrd1;PDBTitle: nmr structure of a two-domain rna-binding fragment of nrd1


Added to library: Sat May 17 08:29:14 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PDELNVSNNPHYRPKPVSYDSTLPPDHIKVYSRTLFIGGVPLNMKEWDLANVLKPFAEVQSVILNNSRKH
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Known secondary structure (DSSP)















TT
TTS

SSS

TT

S
SSSS
SSSSSTT

TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AFVKVYSRHEAENVLQNFNKDGALPLRTRWGVGFGPRDCCDYQHGYSIIPMHRLTDADKKWSVSAQWGGT
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Known secondary structure (DSSP) S
SSS
SS





S

SGGGTSS

GGGTTSSSS
SS
 .........150.........160.........170.........180.....
Sequence SGQPLVTGIVFEEPDIIVGEGVSSKAISQKMPTDSGRNGPRSGKP
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Known secondary structure (DSSP) SSSGGGGT




S

S




























Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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