PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2m47A_

Fold library id	PDB Header	Molecule	Title
c2m47A_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: uncharacterized protein cgl2373;	PDBTitle: solution nmr structure of the polyketide_cyc-like protein cgl2372 from2 corynebacterium glutamicum, northeast structural genomics consortium3 target cgr160

Links to external resources
Added to library: Sat Feb 16 08:35:16 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M P K S L T F E D S I N I A A P I N Q V Y A L V S D I T R T G E W S P V C E K C W W D E D E G P V V G A H F T G R N V T P E R T W E T R S E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
S
S S
S S
G G G T
T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V I V A E P N R C F G W S V T D G N V K W I Y S M E P L E E G T V L T E S W E F T P K G Q R F F H D K F G D K S I E E I E K R R L A A I T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T T T T
T T T S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . .

Sequence I P E T L V A I Q R I L E V E L E H H H H H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	P	K	S	L	T	F	E	D	S	I	N	I	A	A	P	I	N	Q	V	Y	A	L	V	S	D	I	T	R	T	G	E	W	S	P	V	C	E	K	C	W	W	D	E	D	E	G	P	V	V	G	A	H	F	T	G	R	N	V	T	P	E	R	T	W	E	T	R	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S											S	S															S		S	S		S	S							G	G	G	T				T	T										S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	I	V	A	E	P	N	R	C	F	G	W	S	V	T	D	G	N	V	K	W	I	Y	S	M	E	P	L	E	E	G	T	V	L	T	E	S	W	E	F	T	P	K	G	Q	R	F	F	H	D	K	F	G	D	K	S	I	E	E	I	E	K	R	R	L	A	A	I	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T							T	T	T	T											T	T																				T	T	T	S	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Sequence	I	P	E	T	L	V	A	I	Q	R	I	L	E	V	E	L	E	H	H	H	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T		S	S