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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2lv4A_ | PDB header: protein binding | Chain: A: PDB Molecule: putative outer membrane or exported protein; | PDBTitle: zirs c-terminal domain |
Added to library: Sat Aug 25 15:06:35 2012 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | G | P | L | G | S | G | S | K | I | K | L | E | I | Y | N | E | T | D | M | A | S | A | S | G | Y | T | P | V | P | S | V | S | E | F | Q | Y | I | E | T | E | T | I | S | N | T | P | S | P | D | L | T | V | M | S | I | D | K | S | V | L | S | P | G | E | S | A | T | I | T | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | B | G | G | G | ![]() | ![]() | ![]() | B | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | I | V | K | D | I | D | G | N | P | V | N | E | V | H | I | N | K | T | V | A | R | E | N | L | K | G | L | W | D | Y | G | P | L | K | K | E | N | V | P | G | K | Y | T | Q | V | I | T | Y | R | G | H | S | N | E | R | I | D | I | S | F | K | Y | A | M | S | F | T | K | E | I |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | B | B | T | T | S | B | B | ![]() | ![]() | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | ||||||||||||||
Sequence | S | I | R | G | R | L | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | B |
Download: | PDB structure | FASTA sequence |
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