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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2lusA_

Fold library idPDB HeaderMoleculeTitle
c2lusA_PDB header: oxidoreductaseChain: A: PDB Molecule: thioredoxion;PDBTitle: nmr structure of carcinoscorpius rotundicauda thioredoxin related2 protein 16 and its role in regulating transcription factor nf-kb3 activity


Added to library: Sat Jul 14 13:26:27 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MEFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSD
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Known secondary structure (DSSP)


STTSTTTT

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TTSS

TTSTT
S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKYGITGIPALVIVKKDGTLISMNGRGEVQSLGPRAFQN
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Known secondary structure (DSSP)

TTS
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B

TT
TT



STTS
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GGGG
 ...
Sequence WAR
Predicted secondary structure

SS confidence


Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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