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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2lemA_

Fold library idPDB HeaderMoleculeTitle
c2lemA_PDB header: lipid transportChain: A: PDB Molecule: apolipoprotein a-i;PDBTitle: monomeric mouse apoai(1-216)


Added to library: Thu Jan 10 11:25:34 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DEPQSQWDKVKDFANVYVDAVKDSGRDYVSQFESSSLGQQLNLNLLENWDTLGSTVSQLQERLGPLTRDF
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Known secondary structure (DSSP)


SSTTTT




SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence WDNLEKETDWVRQEMNKDLEEVKQKVQPYLDEFQKKWKEDVELYRQKASPQGAELQESARQKLQELQGRL
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Known secondary structure (DSSP) TTTT

TS

S

SS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence SPVAEEFRDRMRTHVDSLRTQLAPHSEQMRESLAQRLAELKSNPTLNEYHSSAKSHLKSLGEKARPALED
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Known secondary structure (DSSP) ST









SSSTS
TTT
 ......
Sequence LRHSLM
Predicted secondary structure

SS confidence





Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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