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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2ldyA_

Fold library idPDB HeaderMoleculeTitle
c2ldyA_PDB header: rna binding proteinChain: A: PDB Molecule: orf1 codes for a 40 kda product;PDBTitle: solution structure of the rmm-ctd domains of human line-1 orf1p


Added to library: Sat Sep 24 11:00:57 2011
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence MGNLRLIGVPESDVENGTKLENTLQDIIQENFPNLARQANVQIQEIQRTPQRYSSRRATPRHIIVRFTKV
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Known secondary structure (DSSP)






TT


T


SSSS

SSSS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence EMKEKMLRAAREKGRVTLKGKPIRLTVDLSAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEI
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Known secondary structure (DSSP) S

TT




TT


TTTTT
 .........150.........160.........170......
Sequence KYFIDKQMLRDFVTTRPALKELLKEALNMERNNRYQ
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Known secondary structure (DSSP) SSTT
T
SS
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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