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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2l6yB_ | PDB header: transcription regulation/oncoprotein | Chain: B: PDB Molecule: lim domain only 2, linker, lim domain-binding protein 1; | PDBTitle: haddock model of gata1nf:lmo2lim2-ldb1lid |
Added to library: Sat Sep 3 09:51:15 2011 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | Y | L | R | L | F | G | Q | D | G | L | C | A | S | C | D | K | R | I | R | A | Y | E | M | T | M | R | V | K | D | K | V | Y | H | L | E | C | F | K | C | A | A | C | Q | K | H | F | S | V | G | D | R | Y | L | L | I | N | S | D | I | V | C | E | Q | D | I | Y | E | W | T | K |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | B | S | S | S | S | B | S | B | S | S | T | T | T | B | S | S | S | T | T | S | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |||
Sequence | I | N | G | G | S | G | G | S | G | G | S | G | G | D | V | M | V | V | G | E | P | T | L | M | G | G | ||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | T | T | T | S | ![]() | ![]() | B | S |
Download: | PDB structure | FASTA sequence |
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