PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2l3wA_

Fold library id	PDB Header	Molecule	Title
c2l3wA_	PDB header: photosynthesis	Chain: A: PDB Molecule: phycobilisome rod linker polypeptide;	PDBTitle: solution nmr structure of the pbs linker domain of phycobilisome rod2 linker polypeptide from synechococcus elongatus, northeast structural3 genomics consortium target snr168a

Links to external resources
Added to library: Sat Dec 18 18:26:17 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M P L E W R A G A S S D E I N A I I R A V Y R Q V L G N D Y V M S T E R L T S A E S L L R G G E I S V R D F V R A V A L S E L Y R E K F F H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T
S S S
S S
T T T T
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N N A H N R F I E L N F K H L L G R A P Y D Q A E V A A H A A T Y H S H G Y D A D I N S Y I D S A E Y T E S F G D N V V P Y F R G L E H H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T S
T
S S T T T T T T S T T T B
T T

. . .

Sequence H H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	P	L	E	W	R	A	G	A	S	S	D	E	I	N	A	I	I	R	A	V	Y	R	Q	V	L	G	N	D	Y	V	M	S	T	E	R	L	T	S	A	E	S	L	L	R	G	G	E	I	S	V	R	D	F	V	R	A	V	A	L	S	E	L	Y	R	E	K	F	F	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B			T	T																			S	S	S				S	S		T	T									T	T		S																				T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	N	A	H	N	R	F	I	E	L	N	F	K	H	L	L	G	R	A	P	Y	D	Q	A	E	V	A	A	H	A	A	T	Y	H	S	H	G	Y	D	A	D	I	N	S	Y	I	D	S	A	E	Y	T	E	S	F	G	D	N	V	V	P	Y	F	R	G	L	E	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S														T	S																			T											S	S	T	T	T	T	T	T	S	T	T	T	B					T	T
	.	.	.
Sequence	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)