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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2kzzA_

Fold library idPDB HeaderMoleculeTitle
c2kzzA_PDB header: transferase/dnaChain: A: PDB Molecule: protein (dna polymerase i);PDBTitle: klenow fragment with normal substrate and zinc only


Added to library: Tue Mar 16 12:27:11 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAP
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Known secondary structure (DSSP)


TTTS

STTSSSS
S
TTT

TT



STT

 .........80.........90.........100.........110.........120.........130.........140
Sequence DQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAE
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Known secondary structure (DSSP)



T
TTS
SSTTT





TTSS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence RWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPL
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Known secondary structure (DSSP) S






SSTT


GGGS
TTS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP
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Known secondary structure (DSSP)
B
B
SSS


S
TTTTSTTTSS
S





 .........290.........300.........310.........320.........330.........340.........350
Sequence STSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQ
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Known secondary structure (DSSP) TTT

TTT
STTTTGGGG

TTTSSB

SS

SSS

SS
GG
 .........360.........370.........380.........390.........400.........410.........420
Sequence NIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLE
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Known secondary structure (DSSP) GS
SSSTBB

TTTTTT
TT

TT

GG
 .........430.........440.........450.........460.........470.........480.........490
Sequence TVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVET
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Known secondary structure (DSSP) G

TT

T

TTTSTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence LDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFE
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Known secondary structure (DSSP) TT


TTTT
SS

STT
 .........570.........580.........590.........600.
Sequence VHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH
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Known secondary structure (DSSP) TTTSS
SSS


SB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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